Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC20.27■□□□□ 0.84
BRPF1P55201 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 AC009477.1-201ENST00000452936 217 ntBASIC20.27■□□□□ 0.84
BRPF1P55201 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC20.27■□□□□ 0.84
BRPF1P55201 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.27■□□□□ 0.84
BRPF1P55201 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.27■□□□□ 0.84
BRPF1P55201 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
BRPF1P55201 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BRPF1P55201 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
BRPF1P55201 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
BRPF1P55201 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BRPF1P55201 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
BRPF1P55201 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.26■□□□□ 0.83
BRPF1P55201 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
BRPF1P55201 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.26■□□□□ 0.83
BRPF1P55201 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.26■□□□□ 0.83
BRPF1P55201 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC20.26■□□□□ 0.83
BRPF1P55201 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.26■□□□□ 0.83
BRPF1P55201 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.26■□□□□ 0.83
BRPF1P55201 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC20.26■□□□□ 0.83
BRPF1P55201 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC20.26■□□□□ 0.83
BRPF1P55201 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.26■□□□□ 0.83
BRPF1P55201 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.26■□□□□ 0.83
BRPF1P55201 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.26■□□□□ 0.83
BRPF1P55201 AC100757.3-201ENST00000622361 1406 ntBASIC20.26■□□□□ 0.83
BRPF1P55201 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BRPF1P55201 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 AMT-233ENST00000636522 1620 ntTSL 2 BASIC20.25■□□□□ 0.83
BRPF1P55201 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC20.25■□□□□ 0.83
BRPF1P55201 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.25■□□□□ 0.83
BRPF1P55201 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.25■□□□□ 0.83
BRPF1P55201 RPL13P2-201ENST00000440687 659 ntBASIC20.25■□□□□ 0.83
BRPF1P55201 KRT17P7-201ENST00000451704 1104 ntBASIC20.25■□□□□ 0.83
BRPF1P55201 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC20.25■□□□□ 0.83
BRPF1P55201 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.25■□□□□ 0.83
BRPF1P55201 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.25■□□□□ 0.83
BRPF1P55201 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.25■□□□□ 0.83
BRPF1P55201 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.25■□□□□ 0.83
BRPF1P55201 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BRPF1P55201 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC20.25■□□□□ 0.83
BRPF1P55201 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC20.24■□□□□ 0.83
BRPF1P55201 AL139384.1-201ENST00000612143 3047 ntBASIC20.24■□□□□ 0.83
BRPF1P55201 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.24■□□□□ 0.83
BRPF1P55201 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BRPF1P55201 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BRPF1P55201 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
BRPF1P55201 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.24■□□□□ 0.83
BRPF1P55201 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC20.24■□□□□ 0.83
BRPF1P55201 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BRPF1P55201 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms