Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
GTF2A1P52655 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GTF2A1P52655 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC15.73■□□□□ 0.11
GTF2A1P52655 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GTF2A1P52655 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GTF2A1P52655 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.73■□□□□ 0.11
GTF2A1P52655 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 ABHD17AP1-201ENST00000358206 933 ntBASIC15.73■□□□□ 0.11
GTF2A1P52655 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.73■□□□□ 0.11
GTF2A1P52655 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.73■□□□□ 0.11
GTF2A1P52655 CD99P1-205ENST00000527459 561 ntBASIC15.73■□□□□ 0.11
GTF2A1P52655 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.73■□□□□ 0.11
GTF2A1P52655 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GTF2A1P52655 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GTF2A1P52655 AC092338.2-201ENST00000568827 1415 ntBASIC15.73■□□□□ 0.11
GTF2A1P52655 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GTF2A1P52655 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GTF2A1P52655 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
GTF2A1P52655 MST1P2-201ENST00000457982 2291 ntBASIC15.73■□□□□ 0.11
GTF2A1P52655 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.73■□□□□ 0.11
GTF2A1P52655 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
GTF2A1P52655 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
GTF2A1P52655 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
GTF2A1P52655 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 RPS2P55-201ENST00000397318 883 ntBASIC15.72■□□□□ 0.11
GTF2A1P52655 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.72■□□□□ 0.11
GTF2A1P52655 AL355355.2-201ENST00000442321 338 ntBASIC15.72■□□□□ 0.11
GTF2A1P52655 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 AC107956.1-201ENST00000494359 873 ntBASIC15.72■□□□□ 0.11
GTF2A1P52655 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.72■□□□□ 0.11
GTF2A1P52655 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.72■□□□□ 0.11
GTF2A1P52655 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC15.72■□□□□ 0.11
GTF2A1P52655 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
GTF2A1P52655 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.72■□□□□ 0.11
GTF2A1P52655 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.72■□□□□ 0.11
GTF2A1P52655 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
GTF2A1P52655 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.71■□□□□ 0.11
GTF2A1P52655 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
GTF2A1P52655 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms