Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.58□□□□□ -0.08
CENPAP49450 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.58□□□□□ -0.08
CENPAP49450 AC023141.13-201ENST00000604991 943 ntBASIC14.58□□□□□ -0.08
CENPAP49450 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC14.58□□□□□ -0.08
CENPAP49450 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.58□□□□□ -0.08
CENPAP49450 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CENPAP49450 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.58□□□□□ -0.08
CENPAP49450 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
CENPAP49450 AC069224.1-201ENST00000566372 1715 ntBASIC14.58□□□□□ -0.08
CENPAP49450 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CENPAP49450 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.58□□□□□ -0.08
CENPAP49450 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 AP005117.1-202ENST00000581724 1908 ntBASIC14.57□□□□□ -0.08
CENPAP49450 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 HCG4B-203ENST00000450128 991 ntBASIC14.57□□□□□ -0.08
CENPAP49450 AC245100.5-201ENST00000452108 331 ntBASIC14.57□□□□□ -0.08
CENPAP49450 AC009078.2-202ENST00000463353 338 ntBASIC14.57□□□□□ -0.08
CENPAP49450 KRT18P34-201ENST00000488218 1270 ntBASIC14.57□□□□□ -0.08
CENPAP49450 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.57□□□□□ -0.08
CENPAP49450 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.57□□□□□ -0.08
CENPAP49450 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.57□□□□□ -0.08
CENPAP49450 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
CENPAP49450 AL365330.1-201ENST00000607459 531 ntBASIC14.57□□□□□ -0.08
CENPAP49450 Z83851.2-201ENST00000609564 659 ntBASIC14.57□□□□□ -0.08
CENPAP49450 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.57□□□□□ -0.08
CENPAP49450 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 ST20-AS1-201ENST00000560255 4223 ntBASIC14.57□□□□□ -0.08
CENPAP49450 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CENPAP49450 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.57□□□□□ -0.08
CENPAP49450 BCAR1-209ENST00000546196 1340 ntBASIC14.57□□□□□ -0.08
CENPAP49450 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.57□□□□□ -0.08
CENPAP49450 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
CENPAP49450 AC112504.1-201ENST00000623415 1841 ntBASIC14.57□□□□□ -0.08
CENPAP49450 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CENPAP49450 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms