Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNNA1P35221 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNNA1P35221 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.93■□□□□ 0.3
CTNNA1P35221 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CTNNA1P35221 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CTNNA1P35221 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNNA1P35221 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNNA1P35221 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNNA1P35221 HLA-A-201ENST00000376802 1334 ntBASIC16.93■□□□□ 0.3
CTNNA1P35221 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CTNNA1P35221 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.93■□□□□ 0.3
CTNNA1P35221 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CTNNA1P35221 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CTNNA1P35221 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 AC034105.1-201ENST00000563488 319 ntBASIC16.92■□□□□ 0.3
CTNNA1P35221 AC018845.2-201ENST00000568326 409 ntBASIC16.92■□□□□ 0.3
CTNNA1P35221 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.92■□□□□ 0.3
CTNNA1P35221 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.92■□□□□ 0.3
CTNNA1P35221 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CTNNA1P35221 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 CICP13-201ENST00000422015 2789 ntBASIC16.92■□□□□ 0.3
CTNNA1P35221 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CTNNA1P35221 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.92■□□□□ 0.3
CTNNA1P35221 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 TMBIM7P-203ENST00000641617 1718 ntBASIC16.91■□□□□ 0.3
CTNNA1P35221 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.91■□□□□ 0.3
CTNNA1P35221 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.91■□□□□ 0.3
CTNNA1P35221 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.91■□□□□ 0.3
CTNNA1P35221 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 AL161645.1-201ENST00000622716 1255 ntBASIC16.91■□□□□ 0.3
CTNNA1P35221 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CTNNA1P35221 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 AC134407.2-201ENST00000625089 1978 ntBASIC16.91■□□□□ 0.3
CTNNA1P35221 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CTNNA1P35221 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
CTNNA1P35221 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.91■□□□□ 0.3
CTNNA1P35221 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms