Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.47□□□□□ -0.09
GDF1P27539 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GDF1P27539 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.47□□□□□ -0.09
GDF1P27539 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GDF1P27539 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.47□□□□□ -0.09
GDF1P27539 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.47□□□□□ -0.09
GDF1P27539 AC015922.1-201ENST00000421102 1152 ntBASIC14.47□□□□□ -0.09
GDF1P27539 EEF1DP4-201ENST00000446006 880 ntBASIC14.47□□□□□ -0.09
GDF1P27539 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.47□□□□□ -0.09
GDF1P27539 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GDF1P27539 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.47□□□□□ -0.09
GDF1P27539 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 TIMM17BP1-201ENST00000545713 516 ntBASIC14.47□□□□□ -0.09
GDF1P27539 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
GDF1P27539 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 MTHFR-217ENST00000641820 1569 ntBASIC14.47□□□□□ -0.09
GDF1P27539 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GDF1P27539 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.47□□□□□ -0.09
GDF1P27539 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.46□□□□□ -0.09
GDF1P27539 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.46□□□□□ -0.09
GDF1P27539 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.46□□□□□ -0.09
GDF1P27539 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.46□□□□□ -0.09
GDF1P27539 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.46□□□□□ -0.09
GDF1P27539 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
GDF1P27539 SRD5A3P1-201ENST00000603021 949 ntBASIC14.46□□□□□ -0.09
GDF1P27539 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 AC084018.2-201ENST00000613093 2607 ntBASIC14.46□□□□□ -0.09
GDF1P27539 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.46□□□□□ -0.09
GDF1P27539 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GDF1P27539 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GDF1P27539 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GDF1P27539 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GDF1P27539 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
GDF1P27539 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GDF1P27539 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GDF1P27539 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GDF1P27539 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.45□□□□□ -0.1
GDF1P27539 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms