Protein–RNA interactions for Protein: P24863

CCNC, Cyclin-C, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNCP24863 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCNCP24863 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCNCP24863 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNCP24863 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNCP24863 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNCP24863 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 AL080243.2-201ENST00000418783 582 ntBASIC16.24■□□□□ 0.19
CCNCP24863 METTL21AP1-201ENST00000438852 635 ntBASIC16.24■□□□□ 0.19
CCNCP24863 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 AC125807.1-201ENST00000483097 614 ntBASIC16.24■□□□□ 0.19
CCNCP24863 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.24■□□□□ 0.19
CCNCP24863 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 AC069120.2-201ENST00000524091 540 ntBASIC16.24■□□□□ 0.19
CCNCP24863 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 MIR6069-201ENST00000620069 79 ntBASIC16.24■□□□□ 0.19
CCNCP24863 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.24■□□□□ 0.19
CCNCP24863 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 FO538757.1-201ENST00000623083 1397 ntBASIC16.24■□□□□ 0.19
CCNCP24863 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CCNCP24863 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCNCP24863 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCNCP24863 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
CCNCP24863 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
CCNCP24863 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.23■□□□□ 0.19
CCNCP24863 AC107890.1-201ENST00000422478 521 ntBASIC16.23■□□□□ 0.19
CCNCP24863 FAM86GP-201ENST00000448322 971 ntBASIC16.23■□□□□ 0.19
CCNCP24863 SERBP1P3-201ENST00000459980 809 ntBASIC16.23■□□□□ 0.19
CCNCP24863 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.23■□□□□ 0.19
CCNCP24863 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.23■□□□□ 0.19
CCNCP24863 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.23■□□□□ 0.19
CCNCP24863 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.23■□□□□ 0.19
CCNCP24863 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.23■□□□□ 0.19
CCNCP24863 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.23■□□□□ 0.19
CCNCP24863 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 CICP13-201ENST00000422015 2789 ntBASIC16.23■□□□□ 0.19
CCNCP24863 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
CCNCP24863 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCNCP24863 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCNCP24863 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
CCNCP24863 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCNCP24863 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CCNCP24863 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.22■□□□□ 0.19
CCNCP24863 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms