Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB4AP20338 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.33□□□□□ -0.44
RAB4AP20338 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB4AP20338 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB4AP20338 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB4AP20338 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 AL390755.1-201ENST00000623716 2027 ntBASIC12.32□□□□□ -0.44
RAB4AP20338 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 AC103564.2-201ENST00000432853 1299 ntBASIC12.32□□□□□ -0.44
RAB4AP20338 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB4AP20338 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 CD99P1-205ENST00000527459 561 ntBASIC12.32□□□□□ -0.44
RAB4AP20338 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
RAB4AP20338 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
RAB4AP20338 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
RAB4AP20338 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB4AP20338 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
RAB4AP20338 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
RAB4AP20338 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.31□□□□□ -0.44
RAB4AP20338 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.31□□□□□ -0.44
RAB4AP20338 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
RAB4AP20338 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
RAB4AP20338 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms