Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 AC005252.2-201ENST00000624630 1141 ntBASIC14.97□□□□□ -0.01
CCL4P13236 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL4P13236 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CCL4P13236 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CCL4P13236 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL4P13236 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CCL4P13236 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.97□□□□□ -0.01
CCL4P13236 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 AC134312.5-201ENST00000568031 1313 ntBASIC14.96□□□□□ -0.01
CCL4P13236 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCL4P13236 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCL4P13236 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CCL4P13236 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL4P13236 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.96□□□□□ -0.01
CCL4P13236 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 FTH1P14-201ENST00000482930 551 ntBASIC14.96□□□□□ -0.01
CCL4P13236 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 FAM8A2P-201ENST00000528813 1142 ntBASIC14.96□□□□□ -0.01
CCL4P13236 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.96□□□□□ -0.01
CCL4P13236 AC009486.1-201ENST00000569860 813 ntBASIC14.96□□□□□ -0.01
CCL4P13236 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCL4P13236 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CCL4P13236 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.96□□□□□ -0.01
CCL4P13236 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
CCL4P13236 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 GPR182-203ENST00000622922 591 ntBASIC14.96□□□□□ -0.01
CCL4P13236 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.96□□□□□ -0.01
CCL4P13236 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.96□□□□□ -0.01
CCL4P13236 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CCL4P13236 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CCL4P13236 AL121723.1-201ENST00000445194 1519 ntBASIC14.96□□□□□ -0.02
CCL4P13236 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
CCL4P13236 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.96□□□□□ -0.02
CCL4P13236 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL4P13236 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CCL4P13236 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CCL4P13236 AC006449.6-201ENST00000612330 2296 ntBASIC14.95□□□□□ -0.02
CCL4P13236 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCL4P13236 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCL4P13236 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.95□□□□□ -0.02
CCL4P13236 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL4P13236 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CCL4P13236 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.95□□□□□ -0.02
CCL4P13236 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL4P13236 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL4P13236 AP001063.1-201ENST00000568332 529 ntBASIC14.95□□□□□ -0.02
CCL4P13236 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL4P13236 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.95□□□□□ -0.02
CCL4P13236 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.95□□□□□ -0.02
CCL4P13236 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.95□□□□□ -0.02
CCL4P13236 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CCL4P13236 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
CCL4P13236 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms