Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
UBL4AP11441 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 MIR346-201ENST00000362234 95 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 HLA-H-201ENST00000383620 1096 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 RPSAP43-201ENST00000402237 625 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.86□□□□□ -0.03
UBL4AP11441 AC069335.1-201ENST00000489972 472 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 AC112482.1-201ENST00000492080 688 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 AC105339.1-204ENST00000636249 355 ntBASIC14.86□□□□□ -0.03
UBL4AP11441 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.86□□□□□ -0.03
UBL4AP11441 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.86□□□□□ -0.03
UBL4AP11441 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBL4AP11441 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
UBL4AP11441 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 FAM220BP-201ENST00000377689 816 ntBASIC14.85□□□□□ -0.03
UBL4AP11441 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 AC005237.2-201ENST00000434368 219 ntBASIC14.85□□□□□ -0.03
UBL4AP11441 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.85□□□□□ -0.03
UBL4AP11441 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL4AP11441 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL4AP11441 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.85□□□□□ -0.03
UBL4AP11441 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.85□□□□□ -0.03
UBL4AP11441 AL513210.1-201ENST00000629608 234 ntBASIC14.85□□□□□ -0.03
UBL4AP11441 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.85□□□□□ -0.03
UBL4AP11441 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
UBL4AP11441 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBL4AP11441 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.85□□□□□ -0.03
UBL4AP11441 AC010491.1-201ENST00000563101 2797 ntBASIC14.85□□□□□ -0.03
UBL4AP11441 AC138035.3-201ENST00000622706 2791 ntBASIC14.85□□□□□ -0.03
UBL4AP11441 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL4AP11441 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL4AP11441 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBL4AP11441 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.84□□□□□ -0.03
UBL4AP11441 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms