Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HOXC6P09630 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HOXC6P09630 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.89■□□□□ 0.45
HOXC6P09630 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXC6P09630 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
HOXC6P09630 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.88■□□□□ 0.45
HOXC6P09630 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXC6P09630 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.88■□□□□ 0.45
HOXC6P09630 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 GPX4-206ENST00000588919 803 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 AC093813.1-201ENST00000605066 256 ntBASIC17.88■□□□□ 0.45
HOXC6P09630 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXC6P09630 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXC6P09630 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
HOXC6P09630 DRD5P1-201ENST00000456605 1438 ntBASIC17.88■□□□□ 0.45
HOXC6P09630 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.88■□□□□ 0.45
HOXC6P09630 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HOXC6P09630 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 AL121723.1-201ENST00000445194 1519 ntBASIC17.88■□□□□ 0.45
HOXC6P09630 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HOXC6P09630 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HOXC6P09630 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HOXC6P09630 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXC6P09630 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXC6P09630 GOLGA2P4-201ENST00000441462 777 ntBASIC17.87■□□□□ 0.45
HOXC6P09630 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 C2orf69P2-201ENST00000562032 1123 ntBASIC17.87■□□□□ 0.45
HOXC6P09630 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.87■□□□□ 0.45
HOXC6P09630 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HOXC6P09630 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.87■□□□□ 0.45
HOXC6P09630 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.87■□□□□ 0.45
HOXC6P09630 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
HOXC6P09630 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HOXC6P09630 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXC6P09630 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HOXC6P09630 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 C2orf27AP3-201ENST00000434123 579 ntBASIC17.86■□□□□ 0.45
HOXC6P09630 KRT8P13-201ENST00000463294 1010 ntBASIC17.86■□□□□ 0.45
HOXC6P09630 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXC6P09630 FAM86HP-204ENST00000513466 959 ntBASIC17.86■□□□□ 0.45
HOXC6P09630 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
HOXC6P09630 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXC6P09630 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXC6P09630 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.86■□□□□ 0.45
HOXC6P09630 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXC6P09630 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.86■□□□□ 0.45
HOXC6P09630 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.86■□□□□ 0.45
HOXC6P09630 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 AL354718.3-201ENST00000616414 581 ntBASIC17.86■□□□□ 0.45
HOXC6P09630 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.86■□□□□ 0.45
HOXC6P09630 CR382287.1-201ENST00000623954 586 ntBASIC17.86■□□□□ 0.45
HOXC6P09630 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HOXC6P09630 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.86■□□□□ 0.45
HOXC6P09630 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms