Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRAP04437 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRAP04437 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRAP04437 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRAP04437 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRAP04437 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TCRAP04437 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRAP04437 KRT18P27-201ENST00000427733 1299 ntBASIC12.21□□□□□ -0.45
TCRAP04437 IGHV3-65-201ENST00000523210 341 ntBASIC12.21□□□□□ -0.45
TCRAP04437 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRAP04437 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC12.21□□□□□ -0.45
TCRAP04437 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
TCRAP04437 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TCRAP04437 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.21□□□□□ -0.45
TCRAP04437 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.21□□□□□ -0.46
TCRAP04437 GSN-215ENST00000545652 2428 ntTSL 2 BASIC12.21□□□□□ -0.46
TCRAP04437 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRAP04437 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TCRAP04437 SNX18-202ENST00000343017 3140 ntBASIC12.21□□□□□ -0.46
TCRAP04437 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRAP04437 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.21□□□□□ -0.46
TCRAP04437 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.21□□□□□ -0.46
TCRAP04437 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRAP04437 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRAP04437 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
TCRAP04437 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TCRAP04437 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
TCRAP04437 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.21□□□□□ -0.46
TCRAP04437 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.46
TCRAP04437 AC026748.1-201ENST00000624349 3251 ntBASIC12.21□□□□□ -0.46
TCRAP04437 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
TCRAP04437 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.2□□□□□ -0.46
TCRAP04437 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.2□□□□□ -0.46
TCRAP04437 AC013726.1-201ENST00000563747 2285 ntBASIC12.2□□□□□ -0.46
TCRAP04437 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 AC073621.1-201ENST00000392730 636 ntBASIC12.2□□□□□ -0.46
TCRAP04437 HMGA1P7-201ENST00000406908 502 ntBASIC12.2□□□□□ -0.46
TCRAP04437 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.2□□□□□ -0.46
TCRAP04437 AC021087.4-201ENST00000563761 564 ntBASIC12.2□□□□□ -0.46
TCRAP04437 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.2□□□□□ -0.46
TCRAP04437 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 AGAP7P-201ENST00000582299 2062 ntBASIC12.2□□□□□ -0.46
TCRAP04437 AGAP14-201ENST00000624701 2060 ntBASIC12.2□□□□□ -0.46
TCRAP04437 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TCRAP04437 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TCRAP04437 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.2□□□□□ -0.46
TCRAP04437 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 AC134407.2-201ENST00000625089 1978 ntBASIC12.19□□□□□ -0.46
TCRAP04437 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC12.19□□□□□ -0.46
TCRAP04437 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TCRAP04437 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms