Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.54■□□□□ 0.4
CD4P01730 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD4P01730 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD4P01730 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD4P01730 CROCCP1-201ENST00000426910 5675 ntBASIC17.54■□□□□ 0.4
CD4P01730 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CD4P01730 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 AC092171.3-201ENST00000610122 2651 ntBASIC17.53■□□□□ 0.4
CD4P01730 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CD4P01730 KRT18P64-201ENST00000434946 1219 ntBASIC17.53■□□□□ 0.4
CD4P01730 AC245100.5-201ENST00000452108 331 ntBASIC17.53■□□□□ 0.4
CD4P01730 RPL13AP25-201ENST00000484130 612 ntBASIC17.53■□□□□ 0.4
CD4P01730 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.53■□□□□ 0.4
CD4P01730 AC120045.2-201ENST00000567334 178 ntBASIC17.53■□□□□ 0.4
CD4P01730 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.53■□□□□ 0.4
CD4P01730 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.53■□□□□ 0.4
CD4P01730 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.53■□□□□ 0.4
CD4P01730 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.53■□□□□ 0.4
CD4P01730 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.53■□□□□ 0.4
CD4P01730 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.53■□□□□ 0.4
CD4P01730 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD4P01730 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 AL592424.1-201ENST00000563624 1536 ntBASIC17.52■□□□□ 0.4
CD4P01730 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CD4P01730 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 MIR1247-201ENST00000408206 136 ntBASIC17.52■□□□□ 0.4
CD4P01730 AC004945.1-201ENST00000416738 983 ntBASIC17.52■□□□□ 0.4
CD4P01730 AC012441.1-201ENST00000446669 685 ntBASIC17.52■□□□□ 0.4
CD4P01730 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
CD4P01730 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CD4P01730 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.52■□□□□ 0.4
CD4P01730 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.52■□□□□ 0.4
CD4P01730 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.52■□□□□ 0.4
CD4P01730 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
CD4P01730 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.52■□□□□ 0.4
CD4P01730 AC009486.1-201ENST00000569860 813 ntBASIC17.52■□□□□ 0.4
CD4P01730 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 MIR3615-201ENST00000581999 87 ntBASIC17.52■□□□□ 0.4
CD4P01730 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.52■□□□□ 0.4
CD4P01730 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CD4P01730 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CD4P01730 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD4P01730 NKILA-202ENST00000614771 2598 ntBASIC17.52■□□□□ 0.39
CD4P01730 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CD4P01730 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.52■□□□□ 0.39
CD4P01730 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD4P01730 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.52■□□□□ 0.39
CD4P01730 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CD4P01730 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CD4P01730 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.51■□□□□ 0.39
CD4P01730 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ALOX12P2-203ENST00000570921 1945 ntBASIC17.51■□□□□ 0.39
CD4P01730 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.51■□□□□ 0.39
CD4P01730 MSTO2P-201ENST00000314835 1709 ntBASIC17.51■□□□□ 0.39
CD4P01730 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms