Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NKX2-2O95096 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NKX2-2O95096 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
NKX2-2O95096 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
NKX2-2O95096 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX2-2O95096 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AL607033.1-201ENST00000623900 1599 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 RPL37AP1-201ENST00000412502 279 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX2-2O95096 KLF2P3-201ENST00000451977 1087 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 AC067863.1-201ENST00000494933 530 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX2-2O95096 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.7□□□□□ -0.06
NKX2-2O95096 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.7□□□□□ -0.06
NKX2-2O95096 MIR6069-201ENST00000620069 79 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AC092127.1-201ENST00000567093 3455 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 FO538757.1-201ENST00000623083 1397 ntBASIC14.7□□□□□ -0.06
NKX2-2O95096 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.7□□□□□ -0.06
NKX2-2O95096 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NKX2-2O95096 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.7□□□□□ -0.06
NKX2-2O95096 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.69□□□□□ -0.06
NKX2-2O95096 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.69□□□□□ -0.06
NKX2-2O95096 SERBP1P3-201ENST00000459980 809 ntBASIC14.69□□□□□ -0.06
NKX2-2O95096 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 AC125807.1-201ENST00000483097 614 ntBASIC14.69□□□□□ -0.06
NKX2-2O95096 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.69□□□□□ -0.06
NKX2-2O95096 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NKX2-2O95096 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.69□□□□□ -0.06
NKX2-2O95096 AC140878.1-201ENST00000565277 250 ntBASIC14.69□□□□□ -0.06
NKX2-2O95096 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-2O95096 AC006538.3-201ENST00000612495 578 ntBASIC14.69□□□□□ -0.06
NKX2-2O95096 SPDYE12P-201ENST00000618416 771 ntBASIC14.69□□□□□ -0.06
NKX2-2O95096 AC093028.1-201ENST00000622998 982 ntBASIC14.69□□□□□ -0.06
NKX2-2O95096 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-2O95096 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NKX2-2O95096 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NKX2-2O95096 AC022532.1-201ENST00000624563 1728 ntBASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms