Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.7■□□□□ 0.91
LTN1O94822 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 PCDHA12-202ENST00000613593 2588 ntBASIC20.7■□□□□ 0.9
LTN1O94822 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC20.7■□□□□ 0.9
LTN1O94822 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC20.7■□□□□ 0.9
LTN1O94822 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 AL023775.1-201ENST00000454907 1746 ntBASIC20.7■□□□□ 0.9
LTN1O94822 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
LTN1O94822 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LTN1O94822 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 AL158070.2-201ENST00000623713 1621 ntBASIC20.7■□□□□ 0.9
LTN1O94822 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LTN1O94822 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.7■□□□□ 0.9
LTN1O94822 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
LTN1O94822 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC20.69■□□□□ 0.9
LTN1O94822 AL391280.1-201ENST00000506969 1062 ntBASIC20.69■□□□□ 0.9
LTN1O94822 SCARNA20.5-201ENST00000516991 142 ntBASIC20.69■□□□□ 0.9
LTN1O94822 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.69■□□□□ 0.9
LTN1O94822 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC20.69■□□□□ 0.9
LTN1O94822 AC005730.2-201ENST00000564549 1184 ntBASIC20.69■□□□□ 0.9
LTN1O94822 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.69■□□□□ 0.9
LTN1O94822 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 LRRC59-203ENST00000576448 1531 ntBASIC20.69■□□□□ 0.9
LTN1O94822 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.69■□□□□ 0.9
LTN1O94822 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
LTN1O94822 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LTN1O94822 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 AMT-224ENST00000635808 1610 ntTSL 5 BASIC20.68■□□□□ 0.9
LTN1O94822 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LTN1O94822 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LTN1O94822 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC20.68■□□□□ 0.9
LTN1O94822 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
LTN1O94822 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.68■□□□□ 0.9
LTN1O94822 AL139094.1-201ENST00000405549 1188 ntBASIC20.68■□□□□ 0.9
LTN1O94822 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.68■□□□□ 0.9
LTN1O94822 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.68■□□□□ 0.9
LTN1O94822 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
LTN1O94822 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.68■□□□□ 0.9
LTN1O94822 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC20.68■□□□□ 0.9
LTN1O94822 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms