Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC20.28■□□□□ 0.84
KCNQ3O43525 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC20.28■□□□□ 0.84
KCNQ3O43525 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
KCNQ3O43525 DRD5P1-201ENST00000456605 1438 ntBASIC20.27■□□□□ 0.84
KCNQ3O43525 REXO1L6P-201ENST00000603433 1515 ntBASIC20.27■□□□□ 0.84
KCNQ3O43525 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNQ3O43525 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KCNQ3O43525 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 PRORSD1P-202ENST00000563365 2154 ntBASIC20.27■□□□□ 0.84
KCNQ3O43525 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.27■□□□□ 0.84
KCNQ3O43525 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNQ3O43525 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNQ3O43525 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.27■□□□□ 0.84
KCNQ3O43525 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 AC104989.1-201ENST00000519711 778 ntBASIC20.27■□□□□ 0.84
KCNQ3O43525 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.27■□□□□ 0.84
KCNQ3O43525 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.27■□□□□ 0.84
KCNQ3O43525 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.27■□□□□ 0.84
KCNQ3O43525 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.27■□□□□ 0.84
KCNQ3O43525 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KCNQ3O43525 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.27■□□□□ 0.83
KCNQ3O43525 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ3O43525 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.27■□□□□ 0.83
KCNQ3O43525 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ3O43525 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ3O43525 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KCNQ3O43525 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 AC092933.1-201ENST00000393644 945 ntBASIC20.26■□□□□ 0.83
KCNQ3O43525 USB1-202ENST00000423271 1217 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
KCNQ3O43525 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC20.26■□□□□ 0.83
KCNQ3O43525 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 CTBP2P5-201ENST00000454986 1264 ntBASIC20.26■□□□□ 0.83
KCNQ3O43525 KRT18P43-201ENST00000469825 1281 ntBASIC20.26■□□□□ 0.83
KCNQ3O43525 AC068587.3-201ENST00000526613 355 ntBASIC20.26■□□□□ 0.83
KCNQ3O43525 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC20.26■□□□□ 0.83
KCNQ3O43525 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KCNQ3O43525 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
KCNQ3O43525 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
KCNQ3O43525 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KCNQ3O43525 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 AP003680.1-201ENST00000598970 3660 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 AC084018.2-201ENST00000613093 2607 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNQ3O43525 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
KCNQ3O43525 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC20.25■□□□□ 0.83
KCNQ3O43525 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KCNQ3O43525 APOA1-205ENST00000375329 927 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
KCNQ3O43525 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
KCNQ3O43525 AC099336.1-201ENST00000417053 1171 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 SOCS2P1-201ENST00000417727 557 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 AC026410.3-201ENST00000514280 936 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC20.25■□□□□ 0.83
KCNQ3O43525 AP005482.1-201ENST00000563722 1273 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC20.25■□□□□ 0.83
KCNQ3O43525 AC133552.6-201ENST00000613406 534 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.25■□□□□ 0.83
KCNQ3O43525 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms