Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HOXA2O43364 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 ACKR1-201ENST00000368121 1240 ntBASIC16.96■□□□□ 0.31
HOXA2O43364 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HOXA2O43364 AC092933.1-201ENST00000393644 945 ntBASIC16.96■□□□□ 0.31
HOXA2O43364 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXA2O43364 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HOXA2O43364 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 AC016694.1-201ENST00000434179 700 ntBASIC16.96■□□□□ 0.31
HOXA2O43364 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.96■□□□□ 0.31
HOXA2O43364 AC026410.3-201ENST00000514280 936 ntBASIC16.96■□□□□ 0.31
HOXA2O43364 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HOXA2O43364 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 AL583810.1-201ENST00000553344 1045 ntBASIC16.96■□□□□ 0.31
HOXA2O43364 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXA2O43364 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXA2O43364 MIR4525-201ENST00000580000 75 ntBASIC16.96■□□□□ 0.31
HOXA2O43364 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXA2O43364 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.96■□□□□ 0.31
HOXA2O43364 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HOXA2O43364 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.96■□□□□ 0.31
HOXA2O43364 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
HOXA2O43364 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA2O43364 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA2O43364 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
HOXA2O43364 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA2O43364 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA2O43364 AC011477.6-201ENST00000604980 1927 ntBASIC16.96■□□□□ 0.3
HOXA2O43364 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.96■□□□□ 0.3
HOXA2O43364 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
HOXA2O43364 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HOXA2O43364 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
HOXA2O43364 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.95■□□□□ 0.3
HOXA2O43364 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 FAM86MP-201ENST00000340703 885 ntBASIC16.95■□□□□ 0.3
HOXA2O43364 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 AC099336.1-201ENST00000417053 1171 ntBASIC16.95■□□□□ 0.3
HOXA2O43364 ACTBP11-201ENST00000436287 1126 ntBASIC16.95■□□□□ 0.3
HOXA2O43364 CSF2RBP1-201ENST00000447905 391 ntBASIC16.95■□□□□ 0.3
HOXA2O43364 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
HOXA2O43364 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.95■□□□□ 0.3
HOXA2O43364 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
HOXA2O43364 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA2O43364 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA2O43364 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.95■□□□□ 0.3
HOXA2O43364 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA2O43364 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA2O43364 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.95■□□□□ 0.3
HOXA2O43364 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 AC005252.2-201ENST00000624630 1141 ntBASIC16.95■□□□□ 0.3
HOXA2O43364 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.95■□□□□ 0.3
HOXA2O43364 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HOXA2O43364 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HOXA2O43364 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HOXA2O43364 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA2O43364 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HOXA2O43364 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.94■□□□□ 0.3
HOXA2O43364 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA2O43364 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA2O43364 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA2O43364 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA2O43364 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HOXA2O43364 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms