Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 DRAXINP1-201ENST00000437611 948 ntBASIC11.26□□□□□ -0.61
LINC01546A6NGU7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.26□□□□□ -0.61
LINC01546A6NGU7 AL139288.1-201ENST00000623748 933 ntBASIC11.26□□□□□ -0.61
LINC01546A6NGU7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LINC01546A6NGU7 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 CYP51A1P2-201ENST00000419457 1499 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AC018892.3-201ENST00000623986 2499 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 TERF1P1-201ENST00000311003 1181 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AC113347.1-201ENST00000413321 391 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AC092647.4-201ENST00000457211 535 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 GGTLC5P-201ENST00000617623 998 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 MTHFR-210ENST00000641407 2387 ntBASIC11.25□□□□□ -0.61
LINC01546A6NGU7 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LINC01546A6NGU7 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
LINC01546A6NGU7 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms