Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRBV5-4A0A0C4DH59 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC022144.1-201ENST00000602255 1580 ntBASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC009090.5-201ENST00000624886 2285 ntBASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 MRPS18AP1-201ENST00000414458 589 ntBASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 LINC01115-203ENST00000606068 577 ntBASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRBV5-4A0A0C4DH59 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 TOMM22P5-201ENST00000416399 439 ntBASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 BASP1P1-201ENST00000430708 665 ntBASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 KRT18P64-201ENST00000434946 1219 ntBASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC092337.1-201ENST00000568699 1129 ntBASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 AC008738.7-201ENST00000609744 511 ntBASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRBV5-4A0A0C4DH59 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms