Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS3ST3A1Q9Y663 MTDHP2-201ENST00000601468 714 ntBASIC23.24■■□□□ 1.31
HS3ST3A1Q9Y663 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS3ST3A1Q9Y663 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS3ST3A1Q9Y663 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS3ST3A1Q9Y663 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 MIR6724-1-201ENST00000616420 92 ntBASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 MIR6724-2-201ENST00000616483 92 ntBASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 MIR6724-4-201ENST00000617390 92 ntBASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 MIR6724-3-201ENST00000622482 92 ntBASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HS3ST3A1Q9Y663 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
HS3ST3A1Q9Y663 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
HS3ST3A1Q9Y663 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.2■■□□□ 1.3
HS3ST3A1Q9Y663 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
HS3ST3A1Q9Y663 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
HS3ST3A1Q9Y663 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
HS3ST3A1Q9Y663 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.18■■□□□ 1.3
HS3ST3A1Q9Y663 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.18■■□□□ 1.3
HS3ST3A1Q9Y663 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.18■■□□□ 1.3
HS3ST3A1Q9Y663 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.18■■□□□ 1.3
HS3ST3A1Q9Y663 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
HS3ST3A1Q9Y663 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
HS3ST3A1Q9Y663 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
HS3ST3A1Q9Y663 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
HS3ST3A1Q9Y663 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
HS3ST3A1Q9Y663 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
HS3ST3A1Q9Y663 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.16■■□□□ 1.3
HS3ST3A1Q9Y663 SRR-208ENST00000576848 588 ntTSL 4 BASIC23.16■■□□□ 1.3
HS3ST3A1Q9Y663 MIR3621-201ENST00000580529 85 ntBASIC23.16■■□□□ 1.3
HS3ST3A1Q9Y663 AL117332.1-201ENST00000622628 974 ntBASIC23.16■■□□□ 1.3
HS3ST3A1Q9Y663 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC23.15■■□□□ 1.3
HS3ST3A1Q9Y663 AL356740.2-201ENST00000601559 647 ntBASIC23.15■■□□□ 1.3
HS3ST3A1Q9Y663 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HS3ST3A1Q9Y663 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HS3ST3A1Q9Y663 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.14■■□□□ 1.29
HS3ST3A1Q9Y663 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
HS3ST3A1Q9Y663 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.14■■□□□ 1.29
HS3ST3A1Q9Y663 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.13■■□□□ 1.29
HS3ST3A1Q9Y663 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.12■■□□□ 1.29
HS3ST3A1Q9Y663 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms