Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
PCDHB9Q9Y5E1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PCDHB9Q9Y5E1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHB9Q9Y5E1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHB9Q9Y5E1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 FOXO3B-201ENST00000395675 1928 ntBASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHB9Q9Y5E1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.84■■□□□ 1.41
PCDHB9Q9Y5E1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB9Q9Y5E1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB9Q9Y5E1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.83■■□□□ 1.41
PCDHB9Q9Y5E1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB9Q9Y5E1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHB9Q9Y5E1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHB9Q9Y5E1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 SLC6A10P-202ENST00000431994 2058 ntBASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 BX664725.1-201ENST00000438252 379 ntBASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHB9Q9Y5E1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 MIR4787-201ENST00000607364 84 ntBASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PCDHB9Q9Y5E1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
PCDHB9Q9Y5E1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB9Q9Y5E1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHB9Q9Y5E1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 AC022616.5-201ENST00000518796 181 ntBASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDHB9Q9Y5E1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.77■■□□□ 1.4
PCDHB9Q9Y5E1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHB9Q9Y5E1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHB9Q9Y5E1 AC020928.2-201ENST00000588717 2197 ntBASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms