Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.9■□□□□ 0.94
LSM2Q9Y333 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 AL162393.1-201ENST00000437852 946 ntBASIC20.9■□□□□ 0.94
LSM2Q9Y333 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.9■□□□□ 0.94
LSM2Q9Y333 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LSM2Q9Y333 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LSM2Q9Y333 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.9■□□□□ 0.94
LSM2Q9Y333 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LSM2Q9Y333 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM2Q9Y333 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM2Q9Y333 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LSM2Q9Y333 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LSM2Q9Y333 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.89■□□□□ 0.94
LSM2Q9Y333 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM2Q9Y333 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.89■□□□□ 0.93
LSM2Q9Y333 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM2Q9Y333 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
LSM2Q9Y333 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM2Q9Y333 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LSM2Q9Y333 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LSM2Q9Y333 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.88■□□□□ 0.93
LSM2Q9Y333 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM2Q9Y333 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.88■□□□□ 0.93
LSM2Q9Y333 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM2Q9Y333 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.88■□□□□ 0.93
LSM2Q9Y333 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LSM2Q9Y333 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LSM2Q9Y333 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.88■□□□□ 0.93
LSM2Q9Y333 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.88■□□□□ 0.93
LSM2Q9Y333 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LSM2Q9Y333 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
LSM2Q9Y333 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LSM2Q9Y333 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LSM2Q9Y333 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.86■□□□□ 0.93
LSM2Q9Y333 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM2Q9Y333 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM2Q9Y333 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM2Q9Y333 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM2Q9Y333 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LSM2Q9Y333 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
LSM2Q9Y333 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L13-201ENST00000554103 1267 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L15-201ENST00000611059 1267 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L23-201ENST00000615195 1269 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L24-201ENST00000617576 1269 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L22-201ENST00000618238 1269 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L20-201ENST00000619712 1269 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L21-201ENST00000622058 1269 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L10-201ENST00000622460 1267 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 DUX4L25-201ENST00000624915 1269 ntBASIC20.86■□□□□ 0.93
LSM2Q9Y333 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
LSM2Q9Y333 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LSM2Q9Y333 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM2Q9Y333 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM2Q9Y333 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LSM2Q9Y333 HLA-L-211ENST00000482052 1765 ntBASIC20.85■□□□□ 0.93
LSM2Q9Y333 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
LSM2Q9Y333 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LSM2Q9Y333 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.85■□□□□ 0.93
LSM2Q9Y333 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
LSM2Q9Y333 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.85■□□□□ 0.93
LSM2Q9Y333 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LSM2Q9Y333 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM2Q9Y333 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LSM2Q9Y333 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM2Q9Y333 HLA-V-202ENST00000446817 847 ntBASIC20.84■□□□□ 0.93
LSM2Q9Y333 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LSM2Q9Y333 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM2Q9Y333 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LSM2Q9Y333 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.83■□□□□ 0.93
LSM2Q9Y333 LINC01971-201ENST00000617888 1048 ntBASIC20.83■□□□□ 0.93
LSM2Q9Y333 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.83■□□□□ 0.92
LSM2Q9Y333 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LSM2Q9Y333 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LSM2Q9Y333 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LSM2Q9Y333 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LSM2Q9Y333 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.82■□□□□ 0.92
LSM2Q9Y333 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM2Q9Y333 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.81■□□□□ 0.92
LSM2Q9Y333 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.81■□□□□ 0.92
LSM2Q9Y333 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM2Q9Y333 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LSM2Q9Y333 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.81■□□□□ 0.92
LSM2Q9Y333 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.8■□□□□ 0.92
LSM2Q9Y333 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms