Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
PCDHA6Q9UN73 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
PCDHA6Q9UN73 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC27■■□□□ 1.91
PCDHA6Q9UN73 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.99■■□□□ 1.91
PCDHA6Q9UN73 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA6Q9UN73 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
PCDHA6Q9UN73 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC26.98■■□□□ 1.91
PCDHA6Q9UN73 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
PCDHA6Q9UN73 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.98■■□□□ 1.91
PCDHA6Q9UN73 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.98■■□□□ 1.91
PCDHA6Q9UN73 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 KRT18P24-201ENST00000344739 1156 ntBASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 AC009299.2-201ENST00000482477 511 ntBASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 AL035685.1-201ENST00000636663 812 ntBASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
PCDHA6Q9UN73 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHA6Q9UN73 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC26.96■■□□□ 1.91
PCDHA6Q9UN73 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA6Q9UN73 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
PCDHA6Q9UN73 AC120024.1-201ENST00000562672 995 ntBASIC26.96■■□□□ 1.91
PCDHA6Q9UN73 TK2-216ENST00000564917 1156 ntTSL 3 BASIC26.95■■□□□ 1.9
PCDHA6Q9UN73 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.95■■□□□ 1.9
PCDHA6Q9UN73 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
PCDHA6Q9UN73 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHA6Q9UN73 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
PCDHA6Q9UN73 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA6Q9UN73 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA6Q9UN73 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
PCDHA6Q9UN73 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.94■■□□□ 1.9
PCDHA6Q9UN73 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
PCDHA6Q9UN73 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA6Q9UN73 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
PCDHA6Q9UN73 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHA6Q9UN73 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHA6Q9UN73 THA1P-201ENST00000590384 1145 ntBASIC26.92■■□□□ 1.9
PCDHA6Q9UN73 AC142381.3-201ENST00000568208 1670 ntBASIC26.92■■□□□ 1.9
PCDHA6Q9UN73 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.92■■□□□ 1.9
PCDHA6Q9UN73 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
PCDHA6Q9UN73 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 AC138932.3-201ENST00000567634 1902 ntBASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.91■■□□□ 1.9
PCDHA6Q9UN73 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.9■■□□□ 1.9
PCDHA6Q9UN73 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
PCDHA6Q9UN73 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.9
PCDHA6Q9UN73 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
PCDHA6Q9UN73 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
PCDHA6Q9UN73 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.87■■□□□ 1.89
PCDHA6Q9UN73 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.87■■□□□ 1.89
PCDHA6Q9UN73 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
PCDHA6Q9UN73 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC26.87■■□□□ 1.89
PCDHA6Q9UN73 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.87■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms