Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 AC022211.4-201ENST00000625094 2161 ntBASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 AL031848.2-201ENST00000607670 837 ntBASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RPUSD1Q9UJJ7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RPUSD1Q9UJJ7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPUSD1Q9UJJ7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.49■□□□□ 0.71
RPUSD1Q9UJJ7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPUSD1Q9UJJ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RPUSD1Q9UJJ7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RPUSD1Q9UJJ7 SLC6A10P-202ENST00000431994 2058 ntBASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.48■□□□□ 0.71
RPUSD1Q9UJJ7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 KRT18P24-201ENST00000344739 1156 ntBASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 AL451085.2-201ENST00000605085 799 ntBASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RPUSD1Q9UJJ7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 THA1P-201ENST00000590384 1145 ntBASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPUSD1Q9UJJ7 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 AC120024.1-201ENST00000562672 995 ntBASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RPUSD1Q9UJJ7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPUSD1Q9UJJ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.44■□□□□ 0.7
RPUSD1Q9UJJ7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPUSD1Q9UJJ7 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPUSD1Q9UJJ7 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPUSD1Q9UJJ7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPUSD1Q9UJJ7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 AC011551.1-201ENST00000614101 683 ntBASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPUSD1Q9UJJ7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 AC138932.3-201ENST00000567634 1902 ntBASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPUSD1Q9UJJ7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 AC009299.2-201ENST00000482477 511 ntBASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPUSD1Q9UJJ7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms