Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
COMMD3Q9UBI1 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
COMMD3Q9UBI1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3Q9UBI1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3Q9UBI1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
COMMD3Q9UBI1 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3Q9UBI1 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
COMMD3Q9UBI1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD3Q9UBI1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.55■□□□□ 0.88
COMMD3Q9UBI1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3Q9UBI1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COMMD3Q9UBI1 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.55■□□□□ 0.88
COMMD3Q9UBI1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.54■□□□□ 0.88
COMMD3Q9UBI1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3Q9UBI1 PKD1P6-201ENST00000343738 4769 ntBASIC20.53■□□□□ 0.88
COMMD3Q9UBI1 DUX4L28-201ENST00000623687 678 ntBASIC20.53■□□□□ 0.88
COMMD3Q9UBI1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3Q9UBI1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3Q9UBI1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COMMD3Q9UBI1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.52■□□□□ 0.88
COMMD3Q9UBI1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.52■□□□□ 0.88
COMMD3Q9UBI1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD3Q9UBI1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COMMD3Q9UBI1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.52■□□□□ 0.88
COMMD3Q9UBI1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
COMMD3Q9UBI1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
COMMD3Q9UBI1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
COMMD3Q9UBI1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 AL359504.2-201ENST00000605506 1601 ntBASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
COMMD3Q9UBI1 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.48■□□□□ 0.87
COMMD3Q9UBI1 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
COMMD3Q9UBI1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3Q9UBI1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3Q9UBI1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3Q9UBI1 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
COMMD3Q9UBI1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 EP400NL-214ENST00000641289 2402 ntBASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
COMMD3Q9UBI1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 LINC00565-201ENST00000562710 2331 ntBASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.46■□□□□ 0.87
COMMD3Q9UBI1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
COMMD3Q9UBI1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 AC233723.2-201ENST00000623798 2106 ntBASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
COMMD3Q9UBI1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
COMMD3Q9UBI1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
COMMD3Q9UBI1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms