Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD9Q9P000 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
COMMD9Q9P000 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.81■□□□□ 0.76
COMMD9Q9P000 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COMMD9Q9P000 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.81■□□□□ 0.76
COMMD9Q9P000 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD9Q9P000 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.8■□□□□ 0.76
COMMD9Q9P000 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COMMD9Q9P000 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
COMMD9Q9P000 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD9Q9P000 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
COMMD9Q9P000 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.79■□□□□ 0.76
COMMD9Q9P000 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD9Q9P000 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
COMMD9Q9P000 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
COMMD9Q9P000 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.78■□□□□ 0.76
COMMD9Q9P000 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.78■□□□□ 0.76
COMMD9Q9P000 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L13-201ENST00000554103 1267 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L15-201ENST00000611059 1267 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L23-201ENST00000615195 1269 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L24-201ENST00000617576 1269 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L22-201ENST00000618238 1269 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L20-201ENST00000619712 1269 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L21-201ENST00000622058 1269 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L10-201ENST00000622460 1267 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 DUX4L25-201ENST00000624915 1269 ntBASIC19.78■□□□□ 0.76
COMMD9Q9P000 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD9Q9P000 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD9Q9P000 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD9Q9P000 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.77■□□□□ 0.76
COMMD9Q9P000 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COMMD9Q9P000 AC141586.4-201ENST00000624558 1573 ntBASIC19.77■□□□□ 0.76
COMMD9Q9P000 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD9Q9P000 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.77■□□□□ 0.75
COMMD9Q9P000 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COMMD9Q9P000 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.76■□□□□ 0.75
COMMD9Q9P000 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD9Q9P000 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.76■□□□□ 0.75
COMMD9Q9P000 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD9Q9P000 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD9Q9P000 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD9Q9P000 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.75■□□□□ 0.75
COMMD9Q9P000 AC148477.6-201ENST00000623746 465 ntBASIC19.75■□□□□ 0.75
COMMD9Q9P000 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
COMMD9Q9P000 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD9Q9P000 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD9Q9P000 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD9Q9P000 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD9Q9P000 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.74■□□□□ 0.75
COMMD9Q9P000 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
COMMD9Q9P000 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.74■□□□□ 0.75
COMMD9Q9P000 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COMMD9Q9P000 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
COMMD9Q9P000 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD9Q9P000 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
COMMD9Q9P000 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COMMD9Q9P000 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms