Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBP1Q9NZI7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
UBP1Q9NZI7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBP1Q9NZI7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.86■■□□□ 1.41
UBP1Q9NZI7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.86■■□□□ 1.41
UBP1Q9NZI7 AP003733.4-201ENST00000623785 1697 ntBASIC23.86■■□□□ 1.41
UBP1Q9NZI7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 TSPY13P-201ENST00000338964 914 ntBASIC23.85■■□□□ 1.41
UBP1Q9NZI7 AC139795.1-202ENST00000500444 432 ntBASIC23.85■■□□□ 1.41
UBP1Q9NZI7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBP1Q9NZI7 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 AL033527.3-201ENST00000566366 1196 ntBASIC23.84■■□□□ 1.41
UBP1Q9NZI7 AC012354.3-201ENST00000623734 483 ntBASIC23.84■■□□□ 1.41
UBP1Q9NZI7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.84■■□□□ 1.41
UBP1Q9NZI7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 LONRF2P2-201ENST00000439212 571 ntBASIC23.83■■□□□ 1.41
UBP1Q9NZI7 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 BHLHE23-202ENST00000612929 1109 ntBASIC23.83■■□□□ 1.41
UBP1Q9NZI7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
UBP1Q9NZI7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBP1Q9NZI7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.83■■□□□ 1.4
UBP1Q9NZI7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBP1Q9NZI7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBP1Q9NZI7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
UBP1Q9NZI7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBP1Q9NZI7 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBP1Q9NZI7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
UBP1Q9NZI7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBP1Q9NZI7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBP1Q9NZI7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBP1Q9NZI7 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
UBP1Q9NZI7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 MIR6089-201ENST00000616698 64 ntBASIC23.8■■□□□ 1.4
UBP1Q9NZI7 AC093323.1-202ENST00000635031 2045 ntBASIC23.8■■□□□ 1.4
UBP1Q9NZI7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
UBP1Q9NZI7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBP1Q9NZI7 LINC01124-201ENST00000409786 2117 ntBASIC23.79■■□□□ 1.4
UBP1Q9NZI7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.79■■□□□ 1.4
UBP1Q9NZI7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
UBP1Q9NZI7 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
UBP1Q9NZI7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.78■■□□□ 1.4
UBP1Q9NZI7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
UBP1Q9NZI7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
UBP1Q9NZI7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC23.76■■□□□ 1.39
UBP1Q9NZI7 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
UBP1Q9NZI7 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.76■■□□□ 1.39
UBP1Q9NZI7 AC010980.1-201ENST00000587192 1142 ntBASIC23.76■■□□□ 1.39
UBP1Q9NZI7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms