Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.58■■□□□ 1.85
VTA1Q9NP79 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
VTA1Q9NP79 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
VTA1Q9NP79 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.58■■□□□ 1.84
VTA1Q9NP79 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
VTA1Q9NP79 AC096887.2-201ENST00000623443 1957 ntBASIC26.57■■□□□ 1.84
VTA1Q9NP79 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VTA1Q9NP79 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC26.57■■□□□ 1.84
VTA1Q9NP79 MIR638-201ENST00000385237 100 ntBASIC26.57■■□□□ 1.84
VTA1Q9NP79 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
VTA1Q9NP79 AL139246.5-201ENST00000606645 996 ntBASIC26.57■■□□□ 1.84
VTA1Q9NP79 AC097639.1-201ENST00000565519 1891 ntBASIC26.57■■□□□ 1.84
VTA1Q9NP79 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
VTA1Q9NP79 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC26.57■■□□□ 1.84
VTA1Q9NP79 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VTA1Q9NP79 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
VTA1Q9NP79 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
VTA1Q9NP79 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
VTA1Q9NP79 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
VTA1Q9NP79 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.55■■□□□ 1.84
VTA1Q9NP79 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 NALT1-201ENST00000429224 738 ntTSL 5 BASIC26.55■■□□□ 1.84
VTA1Q9NP79 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC26.55■■□□□ 1.84
VTA1Q9NP79 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
VTA1Q9NP79 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
VTA1Q9NP79 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VTA1Q9NP79 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
VTA1Q9NP79 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
VTA1Q9NP79 ERN1-208ENST00000606895 2068 ntBASIC26.53■■□□□ 1.84
VTA1Q9NP79 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VTA1Q9NP79 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VTA1Q9NP79 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC26.53■■□□□ 1.84
VTA1Q9NP79 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.53■■□□□ 1.84
VTA1Q9NP79 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.53■■□□□ 1.84
VTA1Q9NP79 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VTA1Q9NP79 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
VTA1Q9NP79 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC26.51■■□□□ 1.83
VTA1Q9NP79 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VTA1Q9NP79 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC26.51■■□□□ 1.83
VTA1Q9NP79 MIR4466-201ENST00000606121 54 ntBASIC26.51■■□□□ 1.83
VTA1Q9NP79 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VTA1Q9NP79 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
VTA1Q9NP79 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.5■■□□□ 1.83
VTA1Q9NP79 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
VTA1Q9NP79 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VTA1Q9NP79 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VTA1Q9NP79 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VTA1Q9NP79 AL512631.2-201ENST00000604634 923 ntBASIC26.5■■□□□ 1.83
VTA1Q9NP79 SNX5-217ENST00000606557 1087 ntBASIC26.5■■□□□ 1.83
VTA1Q9NP79 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.5■■□□□ 1.83
VTA1Q9NP79 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VTA1Q9NP79 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
VTA1Q9NP79 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
VTA1Q9NP79 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.49■■□□□ 1.83
VTA1Q9NP79 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
VTA1Q9NP79 QDPR-206ENST00000508623 601 ntTSL 3 BASIC26.49■■□□□ 1.83
VTA1Q9NP79 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.49■■□□□ 1.83
VTA1Q9NP79 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.49■■□□□ 1.83
VTA1Q9NP79 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VTA1Q9NP79 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTA1Q9NP79 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTA1Q9NP79 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
VTA1Q9NP79 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VTA1Q9NP79 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.48■■□□□ 1.83
VTA1Q9NP79 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.48■■□□□ 1.83
VTA1Q9NP79 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.48■■□□□ 1.83
VTA1Q9NP79 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.48■■□□□ 1.83
VTA1Q9NP79 AC010501.1-201ENST00000606270 1962 ntBASIC26.47■■□□□ 1.83
VTA1Q9NP79 MIR6722-201ENST00000617286 78 ntBASIC26.47■■□□□ 1.83
VTA1Q9NP79 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC26.47■■□□□ 1.83
VTA1Q9NP79 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.47■■□□□ 1.83
VTA1Q9NP79 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.46■■□□□ 1.83
VTA1Q9NP79 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.46■■□□□ 1.83
VTA1Q9NP79 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTA1Q9NP79 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
VTA1Q9NP79 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VTA1Q9NP79 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.83
VTA1Q9NP79 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VTA1Q9NP79 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VTA1Q9NP79 AC110285.6-201ENST00000617652 491 ntBASIC26.45■■□□□ 1.82
VTA1Q9NP79 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VTA1Q9NP79 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VTA1Q9NP79 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VTA1Q9NP79 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.44■■□□□ 1.82
VTA1Q9NP79 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.44■■□□□ 1.82
VTA1Q9NP79 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.44■■□□□ 1.82
VTA1Q9NP79 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
VTA1Q9NP79 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
VTA1Q9NP79 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms