Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCNX3Q9H6A9 FOXO3B-201ENST00000395675 1928 ntBASIC21.42■■□□□ 1.02
PCNX3Q9H6A9 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCNX3Q9H6A9 AC103834.1-201ENST00000520383 144 ntBASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 KRT8P33-201ENST00000508125 1423 ntBASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 AL451085.2-201ENST00000605085 799 ntBASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
PCNX3Q9H6A9 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCNX3Q9H6A9 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PCNX3Q9H6A9 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PCNX3Q9H6A9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PCNX3Q9H6A9 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.39■■□□□ 1.02
PCNX3Q9H6A9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCNX3Q9H6A9 AC138932.3-201ENST00000567634 1902 ntBASIC21.39■■□□□ 1.02
PCNX3Q9H6A9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
PCNX3Q9H6A9 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCNX3Q9H6A9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PCNX3Q9H6A9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.39■■□□□ 1.01
PCNX3Q9H6A9 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PCNX3Q9H6A9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 MIR4281-201ENST00000580852 62 ntBASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PCNX3Q9H6A9 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PCNX3Q9H6A9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 LONRF2P2-201ENST00000439212 571 ntBASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 AC009299.2-201ENST00000482477 511 ntBASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.36■■□□□ 1.01
PCNX3Q9H6A9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PCNX3Q9H6A9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.35■■□□□ 1.01
PCNX3Q9H6A9 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCNX3Q9H6A9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCNX3Q9H6A9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PCNX3Q9H6A9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.35■■□□□ 1.01
PCNX3Q9H6A9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.34■■□□□ 1.01
PCNX3Q9H6A9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCNX3Q9H6A9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCNX3Q9H6A9 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.33■■□□□ 1.01
PCNX3Q9H6A9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCNX3Q9H6A9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PCNX3Q9H6A9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1
PCNX3Q9H6A9 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PCNX3Q9H6A9 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.32■■□□□ 1
PCNX3Q9H6A9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.32■■□□□ 1
PCNX3Q9H6A9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PCNX3Q9H6A9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCNX3Q9H6A9 AL592295.1-201ENST00000400984 884 ntBASIC21.32■■□□□ 1
PCNX3Q9H6A9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PCNX3Q9H6A9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.32■■□□□ 1
PCNX3Q9H6A9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.32■■□□□ 1
PCNX3Q9H6A9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.32■■□□□ 1
PCNX3Q9H6A9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.31■■□□□ 1
PCNX3Q9H6A9 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.31■■□□□ 1
PCNX3Q9H6A9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.31■■□□□ 1
PCNX3Q9H6A9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.31■■□□□ 1
PCNX3Q9H6A9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.31■■□□□ 1
PCNX3Q9H6A9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.3■■□□□ 1
PCNX3Q9H6A9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PCNX3Q9H6A9 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.3■■□□□ 1
PCNX3Q9H6A9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PCNX3Q9H6A9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms