Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC35.93■■■■□ 3.34
PTPN23Q9H3S7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC35.92■■■■□ 3.34
PTPN23Q9H3S7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
PTPN23Q9H3S7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC35.92■■■■□ 3.34
PTPN23Q9H3S7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC35.92■■■■□ 3.34
PTPN23Q9H3S7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC35.91■■■■□ 3.34
PTPN23Q9H3S7 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
PTPN23Q9H3S7 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC35.91■■■■□ 3.34
PTPN23Q9H3S7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC35.9■■■■□ 3.34
PTPN23Q9H3S7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
PTPN23Q9H3S7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC35.88■■■■□ 3.33
PTPN23Q9H3S7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC35.88■■■■□ 3.33
PTPN23Q9H3S7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC35.88■■■■□ 3.33
PTPN23Q9H3S7 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC35.87■■■■□ 3.33
PTPN23Q9H3S7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC35.86■■■■□ 3.33
PTPN23Q9H3S7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC35.86■■■■□ 3.33
PTPN23Q9H3S7 AC131281.2-201ENST00000520478 145 ntBASIC35.86■■■■□ 3.33
PTPN23Q9H3S7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC35.85■■■■□ 3.33
PTPN23Q9H3S7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
PTPN23Q9H3S7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC35.83■■■■□ 3.33
PTPN23Q9H3S7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC35.83■■■■□ 3.33
PTPN23Q9H3S7 AC090877.2-201ENST00000558441 1738 ntBASIC35.83■■■■□ 3.33
PTPN23Q9H3S7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC35.83■■■■□ 3.33
PTPN23Q9H3S7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC35.83■■■■□ 3.33
PTPN23Q9H3S7 MTDHP2-201ENST00000601468 714 ntBASIC35.82■■■■□ 3.32
PTPN23Q9H3S7 SNX5-217ENST00000606557 1087 ntBASIC35.82■■■■□ 3.32
PTPN23Q9H3S7 DUSP8P4-201ENST00000399538 1761 ntBASIC35.81■■■■□ 3.32
PTPN23Q9H3S7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC35.81■■■■□ 3.32
PTPN23Q9H3S7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC35.81■■■■□ 3.32
PTPN23Q9H3S7 AL117332.1-201ENST00000622628 974 ntBASIC35.81■■■■□ 3.32
PTPN23Q9H3S7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC35.81■■■■□ 3.32
PTPN23Q9H3S7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.81■■■■□ 3.32
PTPN23Q9H3S7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
PTPN23Q9H3S7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC35.8■■■■□ 3.32
PTPN23Q9H3S7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC35.8■■■■□ 3.32
PTPN23Q9H3S7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC35.8■■■■□ 3.32
PTPN23Q9H3S7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC35.8■■■■□ 3.32
PTPN23Q9H3S7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC35.79■■■■□ 3.32
PTPN23Q9H3S7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC35.79■■■■□ 3.32
PTPN23Q9H3S7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC35.79■■■■□ 3.32
PTPN23Q9H3S7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC35.79■■■■□ 3.32
PTPN23Q9H3S7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
PTPN23Q9H3S7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
PTPN23Q9H3S7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC35.78■■■■□ 3.32
PTPN23Q9H3S7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC35.78■■■■□ 3.32
PTPN23Q9H3S7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC35.77■■■■□ 3.32
PTPN23Q9H3S7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
PTPN23Q9H3S7 LSM4-201ENST00000252816 986 ntTSL 2 BASIC35.76■■■■□ 3.32
PTPN23Q9H3S7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
PTPN23Q9H3S7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC35.76■■■■□ 3.32
PTPN23Q9H3S7 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC35.76■■■■□ 3.32
PTPN23Q9H3S7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC35.76■■■■□ 3.32
PTPN23Q9H3S7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC35.76■■■■□ 3.31
PTPN23Q9H3S7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC35.75■■■■□ 3.31
PTPN23Q9H3S7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC35.75■■■■□ 3.31
PTPN23Q9H3S7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC35.75■■■■□ 3.31
PTPN23Q9H3S7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC35.75■■■■□ 3.31
PTPN23Q9H3S7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC35.75■■■■□ 3.31
PTPN23Q9H3S7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC35.75■■■■□ 3.31
PTPN23Q9H3S7 AC010997.5-201ENST00000609182 354 ntBASIC35.74■■■■□ 3.31
PTPN23Q9H3S7 MIR6724-1-201ENST00000616420 92 ntBASIC35.74■■■■□ 3.31
PTPN23Q9H3S7 MIR6724-2-201ENST00000616483 92 ntBASIC35.74■■■■□ 3.31
PTPN23Q9H3S7 MIR6724-4-201ENST00000617390 92 ntBASIC35.74■■■■□ 3.31
PTPN23Q9H3S7 MIR6724-3-201ENST00000622482 92 ntBASIC35.74■■■■□ 3.31
PTPN23Q9H3S7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC35.74■■■■□ 3.31
PTPN23Q9H3S7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC35.73■■■■□ 3.31
PTPN23Q9H3S7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
PTPN23Q9H3S7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
PTPN23Q9H3S7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
PTPN23Q9H3S7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC35.72■■■■□ 3.31
PTPN23Q9H3S7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC35.72■■■■□ 3.31
PTPN23Q9H3S7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
PTPN23Q9H3S7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC35.72■■■■□ 3.31
PTPN23Q9H3S7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC35.72■■■■□ 3.31
PTPN23Q9H3S7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
PTPN23Q9H3S7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC35.71■■■■□ 3.31
PTPN23Q9H3S7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC35.7■■■■□ 3.31
PTPN23Q9H3S7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC35.7■■■■□ 3.31
PTPN23Q9H3S7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC35.7■■■■□ 3.31
PTPN23Q9H3S7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC35.7■■■■□ 3.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms