Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 AL139125.2-201ENST00000623134 1869 ntBASIC21.7■■□□□ 1.06
UBQLN3Q9H347 KRT8P33-201ENST00000508125 1423 ntBASIC21.7■■□□□ 1.06
UBQLN3Q9H347 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBQLN3Q9H347 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBQLN3Q9H347 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
UBQLN3Q9H347 YBX1P4-201ENST00000392794 808 ntBASIC21.68■■□□□ 1.06
UBQLN3Q9H347 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.68■■□□□ 1.06
UBQLN3Q9H347 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.68■■□□□ 1.06
UBQLN3Q9H347 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN3Q9H347 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN3Q9H347 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN3Q9H347 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN3Q9H347 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBQLN3Q9H347 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
UBQLN3Q9H347 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
UBQLN3Q9H347 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN3Q9H347 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN3Q9H347 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
UBQLN3Q9H347 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.64■■□□□ 1.06
UBQLN3Q9H347 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN3Q9H347 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.64■■□□□ 1.05
UBQLN3Q9H347 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN3Q9H347 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN3Q9H347 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
UBQLN3Q9H347 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 AL451085.2-201ENST00000605085 799 ntBASIC21.63■■□□□ 1.05
UBQLN3Q9H347 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
UBQLN3Q9H347 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 AC103724.3-201ENST00000564481 992 ntBASIC21.62■■□□□ 1.05
UBQLN3Q9H347 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.62■■□□□ 1.05
UBQLN3Q9H347 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 AC022616.5-201ENST00000518796 181 ntBASIC21.61■■□□□ 1.05
UBQLN3Q9H347 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
UBQLN3Q9H347 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
UBQLN3Q9H347 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms