Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AC025884.2-201ENST00000553429 711 ntBASIC20.07■□□□□ 0.8
NICN1Q9BSH3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NICN1Q9BSH3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NICN1Q9BSH3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NICN1Q9BSH3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NICN1Q9BSH3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NICN1Q9BSH3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NICN1Q9BSH3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NICN1Q9BSH3 AC141586.4-201ENST00000624558 1573 ntBASIC20.06■□□□□ 0.8
NICN1Q9BSH3 AC004812.2-201ENST00000611079 2094 ntBASIC20.06■□□□□ 0.8
NICN1Q9BSH3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.05■□□□□ 0.8
NICN1Q9BSH3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NICN1Q9BSH3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NICN1Q9BSH3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NICN1Q9BSH3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NICN1Q9BSH3 AC060814.1-201ENST00000554326 538 ntBASIC20.03■□□□□ 0.8
NICN1Q9BSH3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.02■□□□□ 0.8
NICN1Q9BSH3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NICN1Q9BSH3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
NICN1Q9BSH3 MIR3960-201ENST00000583311 91 ntBASIC20.02■□□□□ 0.8
NICN1Q9BSH3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NICN1Q9BSH3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NICN1Q9BSH3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.01■□□□□ 0.79
NICN1Q9BSH3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.01■□□□□ 0.79
NICN1Q9BSH3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.01■□□□□ 0.79
NICN1Q9BSH3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.01■□□□□ 0.79
NICN1Q9BSH3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NICN1Q9BSH3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
NICN1Q9BSH3 ABCB10P4-201ENST00000566803 2184 ntBASIC20■□□□□ 0.79
NICN1Q9BSH3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
NICN1Q9BSH3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NICN1Q9BSH3 MIR6089-201ENST00000616698 64 ntBASIC20■□□□□ 0.79
NICN1Q9BSH3 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NICN1Q9BSH3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20■□□□□ 0.79
NICN1Q9BSH3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NICN1Q9BSH3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NICN1Q9BSH3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 SMPD5-203ENST00000639008 1464 ntBASIC19.99■□□□□ 0.79
NICN1Q9BSH3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
NICN1Q9BSH3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
NICN1Q9BSH3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NICN1Q9BSH3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NICN1Q9BSH3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.98■□□□□ 0.79
NICN1Q9BSH3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.98■□□□□ 0.79
NICN1Q9BSH3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NICN1Q9BSH3 AC068473.5-201ENST00000616428 2072 ntBASIC19.98■□□□□ 0.79
NICN1Q9BSH3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NICN1Q9BSH3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NICN1Q9BSH3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms