Protein–RNA interactions for Protein: Q99954

SMR3A, Submaxillary gland androgen-regulated protein 3A, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMR3AQ99954 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMR3AQ99954 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMR3AQ99954 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMR3AQ99954 AC004448.1-201ENST00000458332 883 ntBASIC19.42■□□□□ 0.7
SMR3AQ99954 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.42■□□□□ 0.7
SMR3AQ99954 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.42■□□□□ 0.7
SMR3AQ99954 MIR4767-201ENST00000582827 78 ntBASIC19.42■□□□□ 0.7
SMR3AQ99954 MIR6722-201ENST00000617286 78 ntBASIC19.41■□□□□ 0.7
SMR3AQ99954 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SMR3AQ99954 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMR3AQ99954 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMR3AQ99954 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.4■□□□□ 0.7
SMR3AQ99954 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMR3AQ99954 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SMR3AQ99954 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.4■□□□□ 0.7
SMR3AQ99954 AC022517.1-201ENST00000592429 346 ntBASIC19.4■□□□□ 0.7
SMR3AQ99954 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.4■□□□□ 0.7
SMR3AQ99954 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SMR3AQ99954 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SMR3AQ99954 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SMR3AQ99954 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.39■□□□□ 0.69
SMR3AQ99954 IRS3P-201ENST00000223076 1006 ntBASIC19.38■□□□□ 0.69
SMR3AQ99954 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 RASA4CP-201ENST00000424092 1398 ntBASIC19.38■□□□□ 0.69
SMR3AQ99954 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SMR3AQ99954 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.38■□□□□ 0.69
SMR3AQ99954 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.38■□□□□ 0.69
SMR3AQ99954 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMR3AQ99954 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.37■□□□□ 0.69
SMR3AQ99954 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SMR3AQ99954 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.37■□□□□ 0.69
SMR3AQ99954 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SMR3AQ99954 AL137784.2-201ENST00000607332 1000 ntBASIC19.37■□□□□ 0.69
SMR3AQ99954 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SMR3AQ99954 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SMR3AQ99954 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMR3AQ99954 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMR3AQ99954 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.36■□□□□ 0.69
SMR3AQ99954 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.36■□□□□ 0.69
SMR3AQ99954 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SMR3AQ99954 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SMR3AQ99954 SYT6-210ENST00000641643 1587 ntBASIC19.36■□□□□ 0.69
SMR3AQ99954 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.35■□□□□ 0.69
SMR3AQ99954 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SMR3AQ99954 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.35■□□□□ 0.69
SMR3AQ99954 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
SMR3AQ99954 DUX4L19-201ENST00000557448 1267 ntBASIC19.35■□□□□ 0.69
SMR3AQ99954 AC008764.7-201ENST00000593779 1081 ntBASIC19.35■□□□□ 0.69
SMR3AQ99954 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMR3AQ99954 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.34■□□□□ 0.69
SMR3AQ99954 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.34■□□□□ 0.69
SMR3AQ99954 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.34■□□□□ 0.69
SMR3AQ99954 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.34■□□□□ 0.69
SMR3AQ99954 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMR3AQ99954 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMR3AQ99954 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.33■□□□□ 0.69
SMR3AQ99954 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMR3AQ99954 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.33■□□□□ 0.68
SMR3AQ99954 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.33■□□□□ 0.68
SMR3AQ99954 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.33■□□□□ 0.68
SMR3AQ99954 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.33■□□□□ 0.68
SMR3AQ99954 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.33■□□□□ 0.68
SMR3AQ99954 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMR3AQ99954 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMR3AQ99954 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SMR3AQ99954 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMR3AQ99954 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.32■□□□□ 0.68
SMR3AQ99954 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SMR3AQ99954 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.32■□□□□ 0.68
SMR3AQ99954 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SMR3AQ99954 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.31■□□□□ 0.68
SMR3AQ99954 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.31■□□□□ 0.68
SMR3AQ99954 AC027682.1-201ENST00000562846 899 ntBASIC19.31■□□□□ 0.68
SMR3AQ99954 AC092437.1-201ENST00000624794 1048 ntBASIC19.31■□□□□ 0.68
SMR3AQ99954 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
SMR3AQ99954 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SMR3AQ99954 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMR3AQ99954 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.3■□□□□ 0.68
SMR3AQ99954 ID1-201ENST00000376105 1233 ntBASIC19.3■□□□□ 0.68
SMR3AQ99954 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SMR3AQ99954 SERBP1P1-201ENST00000396021 1160 ntBASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms