Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
S1PR3Q99500 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
S1PR3Q99500 AL592293.1-201ENST00000502889 1188 ntBASIC19.24■□□□□ 0.67
S1PR3Q99500 NTF6A-201ENST00000591175 560 ntBASIC19.24■□□□□ 0.67
S1PR3Q99500 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.24■□□□□ 0.67
S1PR3Q99500 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
S1PR3Q99500 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
S1PR3Q99500 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
S1PR3Q99500 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
S1PR3Q99500 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.24■□□□□ 0.67
S1PR3Q99500 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.23■□□□□ 0.67
S1PR3Q99500 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.23■□□□□ 0.67
S1PR3Q99500 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
S1PR3Q99500 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.23■□□□□ 0.67
S1PR3Q99500 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
S1PR3Q99500 AC018755.3-202ENST00000596210 929 ntBASIC19.23■□□□□ 0.67
S1PR3Q99500 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.23■□□□□ 0.67
S1PR3Q99500 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
S1PR3Q99500 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.23■□□□□ 0.67
S1PR3Q99500 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
S1PR3Q99500 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.22■□□□□ 0.67
S1PR3Q99500 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
S1PR3Q99500 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
S1PR3Q99500 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
S1PR3Q99500 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
S1PR3Q99500 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.22■□□□□ 0.67
S1PR3Q99500 LINC01124-201ENST00000409786 2117 ntBASIC19.22■□□□□ 0.67
S1PR3Q99500 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
S1PR3Q99500 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.22■□□□□ 0.67
S1PR3Q99500 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.22■□□□□ 0.67
S1PR3Q99500 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
S1PR3Q99500 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
S1PR3Q99500 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.21■□□□□ 0.67
S1PR3Q99500 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
S1PR3Q99500 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.2■□□□□ 0.66
S1PR3Q99500 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.2■□□□□ 0.66
S1PR3Q99500 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
S1PR3Q99500 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
S1PR3Q99500 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC19.19■□□□□ 0.66
S1PR3Q99500 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
S1PR3Q99500 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
S1PR3Q99500 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.19■□□□□ 0.66
S1PR3Q99500 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.19■□□□□ 0.66
S1PR3Q99500 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
S1PR3Q99500 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.19■□□□□ 0.66
S1PR3Q99500 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.19■□□□□ 0.66
S1PR3Q99500 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.18■□□□□ 0.66
S1PR3Q99500 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
S1PR3Q99500 FOXO3B-201ENST00000395675 1928 ntBASIC19.18■□□□□ 0.66
S1PR3Q99500 KRT18P60-201ENST00000312876 1297 ntBASIC19.18■□□□□ 0.66
S1PR3Q99500 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
S1PR3Q99500 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
S1PR3Q99500 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
S1PR3Q99500 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
S1PR3Q99500 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
S1PR3Q99500 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
S1PR3Q99500 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
S1PR3Q99500 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
S1PR3Q99500 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
S1PR3Q99500 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
S1PR3Q99500 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
S1PR3Q99500 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
S1PR3Q99500 MIR6089-201ENST00000616698 64 ntBASIC19.16■□□□□ 0.66
S1PR3Q99500 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
S1PR3Q99500 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
S1PR3Q99500 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
S1PR3Q99500 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
S1PR3Q99500 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
S1PR3Q99500 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
S1PR3Q99500 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
S1PR3Q99500 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
S1PR3Q99500 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.15■□□□□ 0.66
S1PR3Q99500 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
S1PR3Q99500 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.15■□□□□ 0.66
S1PR3Q99500 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
S1PR3Q99500 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
S1PR3Q99500 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
S1PR3Q99500 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms