Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNX1Q96RV3 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNX1Q96RV3 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCNX1Q96RV3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.87■□□□□ 0.93
PCNX1Q96RV3 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 SNX5-217ENST00000606557 1087 ntBASIC20.86■□□□□ 0.93
PCNX1Q96RV3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PCNX1Q96RV3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
PCNX1Q96RV3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX1Q96RV3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.85■□□□□ 0.93
PCNX1Q96RV3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX1Q96RV3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PCNX1Q96RV3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.85■□□□□ 0.93
PCNX1Q96RV3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.84■□□□□ 0.93
PCNX1Q96RV3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.84■□□□□ 0.93
PCNX1Q96RV3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.84■□□□□ 0.93
PCNX1Q96RV3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PCNX1Q96RV3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
PCNX1Q96RV3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.83■□□□□ 0.93
PCNX1Q96RV3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCNX1Q96RV3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.83■□□□□ 0.93
PCNX1Q96RV3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.83■□□□□ 0.93
PCNX1Q96RV3 AL031432.3-201ENST00000607698 485 ntBASIC20.83■□□□□ 0.93
PCNX1Q96RV3 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCNX1Q96RV3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCNX1Q96RV3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.82■□□□□ 0.92
PCNX1Q96RV3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.82■□□□□ 0.92
PCNX1Q96RV3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX1Q96RV3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX1Q96RV3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX1Q96RV3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCNX1Q96RV3 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCNX1Q96RV3 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCNX1Q96RV3 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.8■□□□□ 0.92
PCNX1Q96RV3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.8■□□□□ 0.92
PCNX1Q96RV3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.8■□□□□ 0.92
PCNX1Q96RV3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCNX1Q96RV3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 ERN1-208ENST00000606895 2068 ntBASIC20.79■□□□□ 0.92
PCNX1Q96RV3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 AC142381.2-201ENST00000566120 298 ntBASIC20.79■□□□□ 0.92
PCNX1Q96RV3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCNX1Q96RV3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCNX1Q96RV3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCNX1Q96RV3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCNX1Q96RV3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
PCNX1Q96RV3 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCNX1Q96RV3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCNX1Q96RV3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms