Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
AP1S3Q96PC3 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
AP1S3Q96PC3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.59■□□□□ 0.41
AP1S3Q96PC3 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.58■□□□□ 0.41
AP1S3Q96PC3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
AP1S3Q96PC3 AC087741.3-201ENST00000624270 1347 ntBASIC17.58■□□□□ 0.4
AP1S3Q96PC3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
AP1S3Q96PC3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
AP1S3Q96PC3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
AP1S3Q96PC3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
AP1S3Q96PC3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.54■□□□□ 0.4
AP1S3Q96PC3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 AC022211.4-201ENST00000625094 2161 ntBASIC17.53■□□□□ 0.4
AP1S3Q96PC3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.53■□□□□ 0.4
AP1S3Q96PC3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
AP1S3Q96PC3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S3Q96PC3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP1S3Q96PC3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP1S3Q96PC3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S3Q96PC3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AP1S3Q96PC3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
AP1S3Q96PC3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S3Q96PC3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S3Q96PC3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
AP1S3Q96PC3 AC138932.3-201ENST00000567634 1902 ntBASIC17.49■□□□□ 0.39
AP1S3Q96PC3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
AP1S3Q96PC3 DUX4L29-201ENST00000425409 679 ntBASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms