Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.5■■□□□ 1.35
NAF1Q96HR8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NAF1Q96HR8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
NAF1Q96HR8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NAF1Q96HR8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.5■■□□□ 1.35
NAF1Q96HR8 AC100797.4-201ENST00000631653 1827 ntBASIC23.5■■□□□ 1.35
NAF1Q96HR8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NAF1Q96HR8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
NAF1Q96HR8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.5■■□□□ 1.35
NAF1Q96HR8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
NAF1Q96HR8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
NAF1Q96HR8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
NAF1Q96HR8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
NAF1Q96HR8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.49■■□□□ 1.35
NAF1Q96HR8 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.49■■□□□ 1.35
NAF1Q96HR8 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
NAF1Q96HR8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
NAF1Q96HR8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
NAF1Q96HR8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.48■■□□□ 1.35
NAF1Q96HR8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
NAF1Q96HR8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
NAF1Q96HR8 AL139125.2-201ENST00000623134 1869 ntBASIC23.47■■□□□ 1.35
NAF1Q96HR8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NAF1Q96HR8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.47■■□□□ 1.35
NAF1Q96HR8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
NAF1Q96HR8 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
NAF1Q96HR8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.47■■□□□ 1.35
NAF1Q96HR8 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NAF1Q96HR8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NAF1Q96HR8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
NAF1Q96HR8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NAF1Q96HR8 MIR935-201ENST00000401179 91 ntBASIC23.46■■□□□ 1.35
NAF1Q96HR8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
NAF1Q96HR8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.46■■□□□ 1.35
NAF1Q96HR8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
NAF1Q96HR8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
NAF1Q96HR8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.46■■□□□ 1.35
NAF1Q96HR8 AC142381.3-201ENST00000568208 1670 ntBASIC23.46■■□□□ 1.35
NAF1Q96HR8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.46■■□□□ 1.35
NAF1Q96HR8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
NAF1Q96HR8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NAF1Q96HR8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
NAF1Q96HR8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.45■■□□□ 1.35
NAF1Q96HR8 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.45■■□□□ 1.35
NAF1Q96HR8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
NAF1Q96HR8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NAF1Q96HR8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
NAF1Q96HR8 AL356441.2-201ENST00000443009 864 ntBASIC23.45■■□□□ 1.34
NAF1Q96HR8 MIR3960-201ENST00000583311 91 ntBASIC23.45■■□□□ 1.34
NAF1Q96HR8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.45■■□□□ 1.34
NAF1Q96HR8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.45■■□□□ 1.34
NAF1Q96HR8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NAF1Q96HR8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NAF1Q96HR8 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
NAF1Q96HR8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NAF1Q96HR8 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
NAF1Q96HR8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.44■■□□□ 1.34
NAF1Q96HR8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.44■■□□□ 1.34
NAF1Q96HR8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
NAF1Q96HR8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NAF1Q96HR8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
NAF1Q96HR8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NAF1Q96HR8 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NAF1Q96HR8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.44■■□□□ 1.34
NAF1Q96HR8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
NAF1Q96HR8 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.43■■□□□ 1.34
NAF1Q96HR8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.43■■□□□ 1.34
NAF1Q96HR8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
NAF1Q96HR8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.43■■□□□ 1.34
NAF1Q96HR8 AL031848.2-201ENST00000607670 837 ntBASIC23.43■■□□□ 1.34
NAF1Q96HR8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NAF1Q96HR8 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.43■■□□□ 1.34
NAF1Q96HR8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NAF1Q96HR8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
NAF1Q96HR8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NAF1Q96HR8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
NAF1Q96HR8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.42■■□□□ 1.34
NAF1Q96HR8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
NAF1Q96HR8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.41■■□□□ 1.34
NAF1Q96HR8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NAF1Q96HR8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NAF1Q96HR8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NAF1Q96HR8 AC103724.3-201ENST00000564481 992 ntBASIC23.41■■□□□ 1.34
NAF1Q96HR8 MIR4508-201ENST00000584178 70 ntBASIC23.41■■□□□ 1.34
NAF1Q96HR8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
NAF1Q96HR8 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
NAF1Q96HR8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
NAF1Q96HR8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.4■■□□□ 1.34
NAF1Q96HR8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NAF1Q96HR8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.39■■□□□ 1.34
NAF1Q96HR8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
NAF1Q96HR8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.39■■□□□ 1.34
NAF1Q96HR8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
NAF1Q96HR8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms