Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SIPA1Q96FS4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.66■■□□□ 1.38
SIPA1Q96FS4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.66■■□□□ 1.38
SIPA1Q96FS4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.65■■□□□ 1.38
SIPA1Q96FS4 ERN1-208ENST00000606895 2068 ntBASIC23.65■■□□□ 1.38
SIPA1Q96FS4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 MIR3621-201ENST00000580529 85 ntBASIC23.65■■□□□ 1.38
SIPA1Q96FS4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 AL356740.2-201ENST00000601559 647 ntBASIC23.65■■□□□ 1.38
SIPA1Q96FS4 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
SIPA1Q96FS4 AC097639.1-201ENST00000565519 1891 ntBASIC23.64■■□□□ 1.38
SIPA1Q96FS4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIPA1Q96FS4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SIPA1Q96FS4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
SIPA1Q96FS4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SIPA1Q96FS4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
SIPA1Q96FS4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIPA1Q96FS4 AC096887.2-201ENST00000623443 1957 ntBASIC23.63■■□□□ 1.37
SIPA1Q96FS4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIPA1Q96FS4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SIPA1Q96FS4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SIPA1Q96FS4 AC090877.2-201ENST00000558441 1738 ntBASIC23.62■■□□□ 1.37
SIPA1Q96FS4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 AL136116.3-201ENST00000402907 1138 ntBASIC23.62■■□□□ 1.37
SIPA1Q96FS4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SIPA1Q96FS4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
SIPA1Q96FS4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.6■■□□□ 1.37
SIPA1Q96FS4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.6■■□□□ 1.37
SIPA1Q96FS4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
SIPA1Q96FS4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SIPA1Q96FS4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
SIPA1Q96FS4 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.58■■□□□ 1.37
SIPA1Q96FS4 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
SIPA1Q96FS4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.36
SIPA1Q96FS4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.58■■□□□ 1.36
SIPA1Q96FS4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 AL139246.5-201ENST00000606645 996 ntBASIC23.57■■□□□ 1.36
SIPA1Q96FS4 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.57■■□□□ 1.36
SIPA1Q96FS4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SIPA1Q96FS4 AC010501.1-201ENST00000606270 1962 ntBASIC23.56■■□□□ 1.36
SIPA1Q96FS4 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 MIR638-201ENST00000385237 100 ntBASIC23.55■■□□□ 1.36
SIPA1Q96FS4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SIPA1Q96FS4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms