Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 RARRES2P1-201ENST00000474487 481 ntBASIC19.26■□□□□ 0.67
R3HDM4Q96D70 AC129492.7-201ENST00000622992 756 ntBASIC19.26■□□□□ 0.67
R3HDM4Q96D70 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 AC009831.1-201ENST00000580420 1582 ntBASIC19.26■□□□□ 0.67
R3HDM4Q96D70 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
R3HDM4Q96D70 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.25■□□□□ 0.67
R3HDM4Q96D70 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 LINC01124-201ENST00000409786 2117 ntBASIC19.24■□□□□ 0.67
R3HDM4Q96D70 LINC00543-201ENST00000567234 1845 ntBASIC19.24■□□□□ 0.67
R3HDM4Q96D70 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
R3HDM4Q96D70 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HDM4Q96D70 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HDM4Q96D70 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.23■□□□□ 0.67
R3HDM4Q96D70 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.23■□□□□ 0.67
R3HDM4Q96D70 MIR3960-201ENST00000583311 91 ntBASIC19.23■□□□□ 0.67
R3HDM4Q96D70 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
R3HDM4Q96D70 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM4Q96D70 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM4Q96D70 AC025884.2-201ENST00000553429 711 ntBASIC19.22■□□□□ 0.67
R3HDM4Q96D70 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM4Q96D70 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM4Q96D70 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
R3HDM4Q96D70 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
R3HDM4Q96D70 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.2■□□□□ 0.66
R3HDM4Q96D70 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
R3HDM4Q96D70 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
R3HDM4Q96D70 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 RP9P-202ENST00000450133 1212 ntBASIC19.18■□□□□ 0.66
R3HDM4Q96D70 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 AC026202.3-201ENST00000600805 1127 ntBASIC19.18■□□□□ 0.66
R3HDM4Q96D70 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.18■□□□□ 0.66
R3HDM4Q96D70 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.17■□□□□ 0.66
R3HDM4Q96D70 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms