Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2FQ969M7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBE2FQ969M7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 CLDN5-201ENST00000403084 2357 ntBASIC21.38■■□□□ 1.01
UBE2FQ969M7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.38■■□□□ 1.01
UBE2FQ969M7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2FQ969M7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2FQ969M7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2FQ969M7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2FQ969M7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2FQ969M7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2FQ969M7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.37■■□□□ 1.01
UBE2FQ969M7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBE2FQ969M7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.37■■□□□ 1.01
UBE2FQ969M7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.36■■□□□ 1.01
UBE2FQ969M7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.36■■□□□ 1.01
UBE2FQ969M7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBE2FQ969M7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2FQ969M7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2FQ969M7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBE2FQ969M7 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
UBE2FQ969M7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
UBE2FQ969M7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2FQ969M7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2FQ969M7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2FQ969M7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2FQ969M7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
UBE2FQ969M7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
UBE2FQ969M7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2FQ969M7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBE2FQ969M7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2FQ969M7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.33■■□□□ 1.01
UBE2FQ969M7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
UBE2FQ969M7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.33■■□□□ 1.01
UBE2FQ969M7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
UBE2FQ969M7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.33■■□□□ 1
UBE2FQ969M7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.32■■□□□ 1
UBE2FQ969M7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
UBE2FQ969M7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2FQ969M7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.32■■□□□ 1
UBE2FQ969M7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE2FQ969M7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2FQ969M7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBE2FQ969M7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.32■■□□□ 1
UBE2FQ969M7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBE2FQ969M7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.32■■□□□ 1
UBE2FQ969M7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.32■■□□□ 1
UBE2FQ969M7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.32■■□□□ 1
UBE2FQ969M7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.32■■□□□ 1
UBE2FQ969M7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
UBE2FQ969M7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2FQ969M7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBE2FQ969M7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
UBE2FQ969M7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2FQ969M7 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2FQ969M7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE2FQ969M7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
UBE2FQ969M7 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.3■■□□□ 1
UBE2FQ969M7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.3■■□□□ 1
UBE2FQ969M7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE2FQ969M7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.3■■□□□ 1
UBE2FQ969M7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.3■■□□□ 1
UBE2FQ969M7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.29■■□□□ 1
UBE2FQ969M7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2FQ969M7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2FQ969M7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.29■■□□□ 1
UBE2FQ969M7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.29■■□□□ 1
UBE2FQ969M7 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.29■■□□□ 1
UBE2FQ969M7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.29■■□□□ 1
UBE2FQ969M7 DUX4L11-201ENST00000611504 1267 ntBASIC21.29■■□□□ 1
UBE2FQ969M7 DUX4L12-201ENST00000614593 1267 ntBASIC21.29■■□□□ 1
UBE2FQ969M7 DUX4L14-201ENST00000621227 1267 ntBASIC21.29■■□□□ 1
UBE2FQ969M7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2FQ969M7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2FQ969M7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
UBE2FQ969M7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.28■■□□□ 1
UBE2FQ969M7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.28■■□□□ 1
UBE2FQ969M7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.28■■□□□ 1
UBE2FQ969M7 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2FQ969M7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
UBE2FQ969M7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.28■■□□□ 1
UBE2FQ969M7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
UBE2FQ969M7 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms