Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.85■□□□□ 0.93
USP9XQ93008 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP9XQ93008 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP9XQ93008 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.85■□□□□ 0.93
USP9XQ93008 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.85■□□□□ 0.93
USP9XQ93008 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
USP9XQ93008 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP9XQ93008 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
USP9XQ93008 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.85■□□□□ 0.93
USP9XQ93008 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP9XQ93008 IRS3P-201ENST00000223076 1006 ntBASIC20.84■□□□□ 0.93
USP9XQ93008 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.84■□□□□ 0.93
USP9XQ93008 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
USP9XQ93008 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.84■□□□□ 0.93
USP9XQ93008 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.84■□□□□ 0.93
USP9XQ93008 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP9XQ93008 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.83■□□□□ 0.93
USP9XQ93008 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.83■□□□□ 0.93
USP9XQ93008 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP9XQ93008 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
USP9XQ93008 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP9XQ93008 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.83■□□□□ 0.92
USP9XQ93008 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
USP9XQ93008 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP9XQ93008 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.82■□□□□ 0.92
USP9XQ93008 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.82■□□□□ 0.92
USP9XQ93008 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.82■□□□□ 0.92
USP9XQ93008 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
USP9XQ93008 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP9XQ93008 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.81■□□□□ 0.92
USP9XQ93008 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP9XQ93008 MIR4767-201ENST00000582827 78 ntBASIC20.81■□□□□ 0.92
USP9XQ93008 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
USP9XQ93008 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.81■□□□□ 0.92
USP9XQ93008 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP9XQ93008 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP9XQ93008 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
USP9XQ93008 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.81■□□□□ 0.92
USP9XQ93008 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP9XQ93008 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
USP9XQ93008 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
USP9XQ93008 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.8■□□□□ 0.92
USP9XQ93008 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.8■□□□□ 0.92
USP9XQ93008 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP9XQ93008 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
USP9XQ93008 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
USP9XQ93008 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
USP9XQ93008 SYT6-210ENST00000641643 1587 ntBASIC20.79■□□□□ 0.92
USP9XQ93008 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
USP9XQ93008 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.78■□□□□ 0.92
USP9XQ93008 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
USP9XQ93008 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
USP9XQ93008 SLC47A1P1-202ENST00000449666 945 ntBASIC20.78■□□□□ 0.92
USP9XQ93008 AC027682.1-201ENST00000562846 899 ntBASIC20.78■□□□□ 0.92
USP9XQ93008 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP9XQ93008 AC066615.1-201ENST00000640911 628 ntBASIC20.77■□□□□ 0.92
USP9XQ93008 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
USP9XQ93008 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
USP9XQ93008 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP9XQ93008 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.76■□□□□ 0.91
USP9XQ93008 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.76■□□□□ 0.91
USP9XQ93008 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP9XQ93008 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP9XQ93008 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP9XQ93008 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
USP9XQ93008 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP9XQ93008 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
USP9XQ93008 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP9XQ93008 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.75■□□□□ 0.91
USP9XQ93008 AL031602.1-201ENST00000633169 911 ntBASIC20.75■□□□□ 0.91
USP9XQ93008 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
USP9XQ93008 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
USP9XQ93008 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP9XQ93008 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
USP9XQ93008 SERBP1P1-201ENST00000396021 1160 ntBASIC20.74■□□□□ 0.91
USP9XQ93008 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.74■□□□□ 0.91
USP9XQ93008 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
USP9XQ93008 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP9XQ93008 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP9XQ93008 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP9XQ93008 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP9XQ93008 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP9XQ93008 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.74■□□□□ 0.91
USP9XQ93008 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.74■□□□□ 0.91
USP9XQ93008 AC008764.7-201ENST00000593779 1081 ntBASIC20.74■□□□□ 0.91
USP9XQ93008 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP9XQ93008 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.73■□□□□ 0.91
USP9XQ93008 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
USP9XQ93008 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.73■□□□□ 0.91
USP9XQ93008 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.73■□□□□ 0.91
USP9XQ93008 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP9XQ93008 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.73■□□□□ 0.91
USP9XQ93008 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP9XQ93008 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms