Protein–RNA interactions for Protein: Q8WYR4

RSPH1, Radial spoke head 1 homolog, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH1Q8WYR4 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
RSPH1Q8WYR4 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.44■■□□□ 1.66
RSPH1Q8WYR4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 ERN1-208ENST00000606895 2068 ntBASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 AL117332.1-201ENST00000622628 974 ntBASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
RSPH1Q8WYR4 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 AL356740.2-201ENST00000601559 647 ntBASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
RSPH1Q8WYR4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 AF131216.4-201ENST00000638924 1588 ntBASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.41■■□□□ 1.66
RSPH1Q8WYR4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 AC096887.2-201ENST00000623443 1957 ntBASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 AC090877.2-201ENST00000558441 1738 ntBASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
RSPH1Q8WYR4 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC25.39■■□□□ 1.66
RSPH1Q8WYR4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
RSPH1Q8WYR4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.66
RSPH1Q8WYR4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC25.39■■□□□ 1.66
RSPH1Q8WYR4 AC131281.2-201ENST00000520478 145 ntBASIC25.39■■□□□ 1.66
RSPH1Q8WYR4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC25.39■■□□□ 1.66
RSPH1Q8WYR4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RSPH1Q8WYR4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
RSPH1Q8WYR4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH1Q8WYR4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH1Q8WYR4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH1Q8WYR4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC25.38■■□□□ 1.65
RSPH1Q8WYR4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC25.38■■□□□ 1.65
RSPH1Q8WYR4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
RSPH1Q8WYR4 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
RSPH1Q8WYR4 AC097639.1-201ENST00000565519 1891 ntBASIC25.36■■□□□ 1.65
RSPH1Q8WYR4 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
RSPH1Q8WYR4 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
RSPH1Q8WYR4 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
RSPH1Q8WYR4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.36■■□□□ 1.65
RSPH1Q8WYR4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
RSPH1Q8WYR4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 MIR6722-201ENST00000617286 78 ntBASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
RSPH1Q8WYR4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 AL139246.5-201ENST00000606645 996 ntBASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 AC010501.1-201ENST00000606270 1962 ntBASIC25.34■■□□□ 1.65
RSPH1Q8WYR4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
RSPH1Q8WYR4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.32■■□□□ 1.64
RSPH1Q8WYR4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.32■■□□□ 1.64
RSPH1Q8WYR4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH1Q8WYR4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
RSPH1Q8WYR4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.32■■□□□ 1.64
RSPH1Q8WYR4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.32■■□□□ 1.64
RSPH1Q8WYR4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms