Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 AC026202.3-201ENST00000600805 1127 ntBASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 AC133561.1-201ENST00000568600 2415 ntBASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CCHCR1Q8TD31 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 AC133552.2-201ENST00000619106 1032 ntBASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CCHCR1Q8TD31 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
CCHCR1Q8TD31 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCHCR1Q8TD31 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCHCR1Q8TD31 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.31■■□□□ 1.48
CCHCR1Q8TD31 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCHCR1Q8TD31 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
CCHCR1Q8TD31 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.31■■□□□ 1.48
CCHCR1Q8TD31 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.31■■□□□ 1.48
CCHCR1Q8TD31 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 AC009831.1-201ENST00000580420 1582 ntBASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCHCR1Q8TD31 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 RAP2CP1-202ENST00000605179 643 ntBASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CCHCR1Q8TD31 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 NTF6A-201ENST00000591175 560 ntBASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 U85056.1-201ENST00000616429 682 ntBASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 MIR6089-201ENST00000616698 64 ntBASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.28■■□□□ 1.48
CCHCR1Q8TD31 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCHCR1Q8TD31 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
CCHCR1Q8TD31 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCHCR1Q8TD31 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCHCR1Q8TD31 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCHCR1Q8TD31 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC24.25■■□□□ 1.47
CCHCR1Q8TD31 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCHCR1Q8TD31 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.23■■□□□ 1.47
CCHCR1Q8TD31 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCHCR1Q8TD31 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCHCR1Q8TD31 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCHCR1Q8TD31 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCHCR1Q8TD31 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCHCR1Q8TD31 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCHCR1Q8TD31 AL592293.1-201ENST00000502889 1188 ntBASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms