Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 AC148477.6-201ENST00000623746 465 ntBASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.12■■□□□ 1.29
RFWD2Q8NHY2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.11■■□□□ 1.29
RFWD2Q8NHY2 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.1■■□□□ 1.29
RFWD2Q8NHY2 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
RFWD2Q8NHY2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 AC008813.1-201ENST00000536597 885 ntBASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.08■■□□□ 1.29
RFWD2Q8NHY2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RFWD2Q8NHY2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
RFWD2Q8NHY2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L13-201ENST00000554103 1267 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L15-201ENST00000611059 1267 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L23-201ENST00000615195 1269 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L24-201ENST00000617576 1269 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L22-201ENST00000618238 1269 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L20-201ENST00000619712 1269 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L21-201ENST00000622058 1269 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L10-201ENST00000622460 1267 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 DUX4L25-201ENST00000624915 1269 ntBASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RFWD2Q8NHY2 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RFWD2Q8NHY2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 MED25-210ENST00000612854 801 ntTSL 5 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 MED25-214ENST00000622402 642 ntTSL 5 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RFWD2Q8NHY2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.04■■□□□ 1.28
RFWD2Q8NHY2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
RFWD2Q8NHY2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD2Q8NHY2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD2Q8NHY2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RFWD2Q8NHY2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RFWD2Q8NHY2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.03■■□□□ 1.28
RFWD2Q8NHY2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.02■■□□□ 1.28
RFWD2Q8NHY2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.02■■□□□ 1.28
RFWD2Q8NHY2 HLA-V-202ENST00000446817 847 ntBASIC23.02■■□□□ 1.28
RFWD2Q8NHY2 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.02■■□□□ 1.28
RFWD2Q8NHY2 MIR7108-201ENST00000614319 87 ntBASIC23.02■■□□□ 1.28
RFWD2Q8NHY2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
RFWD2Q8NHY2 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms