Protein–RNA interactions for Protein: Q8NHV9

RHOXF1, Rhox homeobox family member 1, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1Q8NHV9 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.32■■□□□ 1
RHOXF1Q8NHV9 LINC01971-201ENST00000617888 1048 ntBASIC21.32■■□□□ 1
RHOXF1Q8NHV9 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.32■■□□□ 1
RHOXF1Q8NHV9 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.32■■□□□ 1
RHOXF1Q8NHV9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.32■■□□□ 1
RHOXF1Q8NHV9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.32■■□□□ 1
RHOXF1Q8NHV9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 C9orf163-202ENST00000624034 2573 ntBASIC21.31■■□□□ 1
RHOXF1Q8NHV9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.31■■□□□ 1
RHOXF1Q8NHV9 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.3■■□□□ 1
RHOXF1Q8NHV9 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.3■■□□□ 1
RHOXF1Q8NHV9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.3■■□□□ 1
RHOXF1Q8NHV9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.3■■□□□ 1
RHOXF1Q8NHV9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RHOXF1Q8NHV9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.3■■□□□ 1
RHOXF1Q8NHV9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.3■■□□□ 1
RHOXF1Q8NHV9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.29■■□□□ 1
RHOXF1Q8NHV9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RHOXF1Q8NHV9 HLA-V-202ENST00000446817 847 ntBASIC21.28■■□□□ 1
RHOXF1Q8NHV9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.28■■□□□ 1
RHOXF1Q8NHV9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RHOXF1Q8NHV9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RHOXF1Q8NHV9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RHOXF1Q8NHV9 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.27■■□□□ 1
RHOXF1Q8NHV9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RHOXF1Q8NHV9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RHOXF1Q8NHV9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RHOXF1Q8NHV9 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RHOXF1Q8NHV9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RHOXF1Q8NHV9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RHOXF1Q8NHV9 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RHOXF1Q8NHV9 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RHOXF1Q8NHV9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RHOXF1Q8NHV9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RHOXF1Q8NHV9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RHOXF1Q8NHV9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.2■□□□□ 0.99
RHOXF1Q8NHV9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RHOXF1Q8NHV9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms