Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC168Q8NDH2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.94■□□□□ 0.78
CCDC168Q8NDH2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC168Q8NDH2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC168Q8NDH2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC168Q8NDH2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CCDC168Q8NDH2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC168Q8NDH2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC168Q8NDH2 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.92■□□□□ 0.78
CCDC168Q8NDH2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC168Q8NDH2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CCDC168Q8NDH2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 MIR4767-201ENST00000582827 78 ntBASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.91■□□□□ 0.78
CCDC168Q8NDH2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CCDC168Q8NDH2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC168Q8NDH2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC168Q8NDH2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.9■□□□□ 0.78
CCDC168Q8NDH2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CCDC168Q8NDH2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC168Q8NDH2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CCDC168Q8NDH2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
CCDC168Q8NDH2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CCDC168Q8NDH2 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CCDC168Q8NDH2 AC027682.1-201ENST00000562846 899 ntBASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 AC008764.7-201ENST00000593779 1081 ntBASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 SERBP1P1-201ENST00000396021 1160 ntBASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CCDC168Q8NDH2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC168Q8NDH2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.86■□□□□ 0.77
CCDC168Q8NDH2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CCDC168Q8NDH2 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC168Q8NDH2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC168Q8NDH2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CCDC168Q8NDH2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCDC168Q8NDH2 DUX4L19-201ENST00000557448 1267 ntBASIC19.85■□□□□ 0.77
CCDC168Q8NDH2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC168Q8NDH2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.85■□□□□ 0.77
CCDC168Q8NDH2 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC168Q8NDH2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC168Q8NDH2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC168Q8NDH2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
CCDC168Q8NDH2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC168Q8NDH2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC168Q8NDH2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC168Q8NDH2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC168Q8NDH2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC168Q8NDH2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC168Q8NDH2 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC168Q8NDH2 AL137784.2-201ENST00000607332 1000 ntBASIC19.83■□□□□ 0.76
CCDC168Q8NDH2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC168Q8NDH2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCDC168Q8NDH2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC168Q8NDH2 AL031602.1-201ENST00000633169 911 ntBASIC19.81■□□□□ 0.76
CCDC168Q8NDH2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC168Q8NDH2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms