Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C3orf56Q8N813 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.42■□□□□ 0.54
C3orf56Q8N813 BX255925.1-201ENST00000566954 1854 ntBASIC18.41■□□□□ 0.54
C3orf56Q8N813 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C3orf56Q8N813 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C3orf56Q8N813 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.41■□□□□ 0.54
C3orf56Q8N813 DUX4L19-201ENST00000557448 1267 ntBASIC18.41■□□□□ 0.54
C3orf56Q8N813 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
C3orf56Q8N813 MIR6722-201ENST00000617286 78 ntBASIC18.41■□□□□ 0.54
C3orf56Q8N813 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.41■□□□□ 0.54
C3orf56Q8N813 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
C3orf56Q8N813 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C3orf56Q8N813 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C3orf56Q8N813 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C3orf56Q8N813 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.4■□□□□ 0.54
C3orf56Q8N813 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.4■□□□□ 0.54
C3orf56Q8N813 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C3orf56Q8N813 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
C3orf56Q8N813 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C3orf56Q8N813 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
C3orf56Q8N813 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
C3orf56Q8N813 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
C3orf56Q8N813 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.39■□□□□ 0.53
C3orf56Q8N813 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.39■□□□□ 0.53
C3orf56Q8N813 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
C3orf56Q8N813 AC087623.3-201ENST00000607047 1098 ntBASIC18.39■□□□□ 0.53
C3orf56Q8N813 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C3orf56Q8N813 AF131216.4-201ENST00000638924 1588 ntBASIC18.38■□□□□ 0.53
C3orf56Q8N813 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
C3orf56Q8N813 MIR939-201ENST00000401314 82 ntBASIC18.38■□□□□ 0.53
C3orf56Q8N813 AC091305.1-201ENST00000479476 895 ntBASIC18.38■□□□□ 0.53
C3orf56Q8N813 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.38■□□□□ 0.53
C3orf56Q8N813 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
C3orf56Q8N813 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
C3orf56Q8N813 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
C3orf56Q8N813 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
C3orf56Q8N813 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.37■□□□□ 0.53
C3orf56Q8N813 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
C3orf56Q8N813 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C3orf56Q8N813 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
C3orf56Q8N813 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
C3orf56Q8N813 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
C3orf56Q8N813 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
C3orf56Q8N813 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.36■□□□□ 0.53
C3orf56Q8N813 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.36■□□□□ 0.53
C3orf56Q8N813 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
C3orf56Q8N813 AP001330.3-201ENST00000520123 633 ntBASIC18.35■□□□□ 0.53
C3orf56Q8N813 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.35■□□□□ 0.53
C3orf56Q8N813 SNX5-217ENST00000606557 1087 ntBASIC18.35■□□□□ 0.53
C3orf56Q8N813 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.34■□□□□ 0.53
C3orf56Q8N813 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C3orf56Q8N813 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
C3orf56Q8N813 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C3orf56Q8N813 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C3orf56Q8N813 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C3orf56Q8N813 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.34■□□□□ 0.53
C3orf56Q8N813 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.34■□□□□ 0.53
C3orf56Q8N813 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.34■□□□□ 0.53
C3orf56Q8N813 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
C3orf56Q8N813 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
C3orf56Q8N813 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
C3orf56Q8N813 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
C3orf56Q8N813 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
C3orf56Q8N813 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
C3orf56Q8N813 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C3orf56Q8N813 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
C3orf56Q8N813 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.33■□□□□ 0.52
C3orf56Q8N813 AC092171.4-201ENST00000609130 632 ntBASIC18.33■□□□□ 0.52
C3orf56Q8N813 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.33■□□□□ 0.52
C3orf56Q8N813 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.33■□□□□ 0.52
C3orf56Q8N813 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C3orf56Q8N813 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.32■□□□□ 0.52
C3orf56Q8N813 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
C3orf56Q8N813 SYT6-210ENST00000641643 1587 ntBASIC18.32■□□□□ 0.52
C3orf56Q8N813 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
C3orf56Q8N813 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
C3orf56Q8N813 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C3orf56Q8N813 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
C3orf56Q8N813 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C3orf56Q8N813 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C3orf56Q8N813 AC090192.1-201ENST00000517740 490 ntBASIC18.31■□□□□ 0.52
C3orf56Q8N813 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C3orf56Q8N813 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C3orf56Q8N813 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
C3orf56Q8N813 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C3orf56Q8N813 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
C3orf56Q8N813 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C3orf56Q8N813 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.3■□□□□ 0.52
C3orf56Q8N813 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C3orf56Q8N813 CA15P2-201ENST00000611168 834 ntBASIC18.3■□□□□ 0.52
C3orf56Q8N813 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.3■□□□□ 0.52
C3orf56Q8N813 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C3orf56Q8N813 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C3orf56Q8N813 RASA4CP-201ENST00000424092 1398 ntBASIC18.3■□□□□ 0.52
C3orf56Q8N813 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C3orf56Q8N813 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C3orf56Q8N813 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C3orf56Q8N813 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C3orf56Q8N813 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.29■□□□□ 0.52
C3orf56Q8N813 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms