Protein–RNA interactions for Protein: Q8N271

PROM2, Prominin-2, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2Q8N271 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
PROM2Q8N271 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PROM2Q8N271 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PROM2Q8N271 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.51■■■□□ 2.47
PROM2Q8N271 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
PROM2Q8N271 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PROM2Q8N271 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PROM2Q8N271 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
PROM2Q8N271 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.49■■■□□ 2.47
PROM2Q8N271 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC30.49■■■□□ 2.47
PROM2Q8N271 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PROM2Q8N271 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PROM2Q8N271 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.48■■■□□ 2.47
PROM2Q8N271 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC30.48■■■□□ 2.47
PROM2Q8N271 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC30.47■■■□□ 2.47
PROM2Q8N271 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.47■■■□□ 2.47
PROM2Q8N271 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PROM2Q8N271 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PROM2Q8N271 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.46■■■□□ 2.47
PROM2Q8N271 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PROM2Q8N271 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC30.46■■■□□ 2.47
PROM2Q8N271 CA15P2-201ENST00000611168 834 ntBASIC30.46■■■□□ 2.47
PROM2Q8N271 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PROM2Q8N271 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PROM2Q8N271 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC30.46■■■□□ 2.47
PROM2Q8N271 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PROM2Q8N271 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
PROM2Q8N271 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
PROM2Q8N271 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PROM2Q8N271 IKBKGP1-201ENST00000612193 1073 ntBASIC30.45■■■□□ 2.47
PROM2Q8N271 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
PROM2Q8N271 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC30.45■■■□□ 2.46
PROM2Q8N271 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PROM2Q8N271 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
PROM2Q8N271 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PROM2Q8N271 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PROM2Q8N271 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.44■■■□□ 2.46
PROM2Q8N271 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.44■■■□□ 2.46
PROM2Q8N271 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.44■■■□□ 2.46
PROM2Q8N271 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.44■■■□□ 2.46
PROM2Q8N271 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
PROM2Q8N271 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.43■■■□□ 2.46
PROM2Q8N271 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC30.43■■■□□ 2.46
PROM2Q8N271 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PROM2Q8N271 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
PROM2Q8N271 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
PROM2Q8N271 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
PROM2Q8N271 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
PROM2Q8N271 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PROM2Q8N271 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.41■■■□□ 2.46
PROM2Q8N271 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
PROM2Q8N271 MIR4767-201ENST00000582827 78 ntBASIC30.41■■■□□ 2.46
PROM2Q8N271 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.41■■■□□ 2.46
PROM2Q8N271 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.41■■■□□ 2.46
PROM2Q8N271 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PROM2Q8N271 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC30.41■■■□□ 2.46
PROM2Q8N271 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
PROM2Q8N271 RASA4CP-201ENST00000424092 1398 ntBASIC30.41■■■□□ 2.46
PROM2Q8N271 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PROM2Q8N271 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PROM2Q8N271 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PROM2Q8N271 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
PROM2Q8N271 AC004448.1-201ENST00000458332 883 ntBASIC30.38■■■□□ 2.45
PROM2Q8N271 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
PROM2Q8N271 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.38■■■□□ 2.45
PROM2Q8N271 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
PROM2Q8N271 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PROM2Q8N271 DUX4L19-201ENST00000557448 1267 ntBASIC30.37■■■□□ 2.45
PROM2Q8N271 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.37■■■□□ 2.45
PROM2Q8N271 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PROM2Q8N271 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC30.36■■■□□ 2.45
PROM2Q8N271 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC30.36■■■□□ 2.45
PROM2Q8N271 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.36■■■□□ 2.45
PROM2Q8N271 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
PROM2Q8N271 AC142472.1-201ENST00000612013 1741 ntBASIC30.36■■■□□ 2.45
PROM2Q8N271 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.35■■■□□ 2.45
PROM2Q8N271 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PROM2Q8N271 IRS3P-201ENST00000223076 1006 ntBASIC30.35■■■□□ 2.45
PROM2Q8N271 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PROM2Q8N271 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
PROM2Q8N271 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC30.35■■■□□ 2.45
PROM2Q8N271 AC022517.1-201ENST00000592429 346 ntBASIC30.35■■■□□ 2.45
PROM2Q8N271 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.35■■■□□ 2.45
PROM2Q8N271 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
PROM2Q8N271 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PROM2Q8N271 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PROM2Q8N271 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC30.34■■■□□ 2.45
PROM2Q8N271 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.34■■■□□ 2.45
PROM2Q8N271 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PROM2Q8N271 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
PROM2Q8N271 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC30.33■■■□□ 2.45
PROM2Q8N271 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC30.32■■■□□ 2.45
PROM2Q8N271 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
PROM2Q8N271 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
PROM2Q8N271 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC30.31■■■□□ 2.44
PROM2Q8N271 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC30.31■■■□□ 2.44
PROM2Q8N271 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC30.31■■■□□ 2.44
PROM2Q8N271 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
PROM2Q8N271 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.3■■■□□ 2.44
PROM2Q8N271 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms