Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.3■■□□□ 1.8
CCDC60Q8IWA6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC26.29■■□□□ 1.8
CCDC60Q8IWA6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC60Q8IWA6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC60Q8IWA6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC60Q8IWA6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC60Q8IWA6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 AC090877.2-201ENST00000558441 1738 ntBASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC60Q8IWA6 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC60Q8IWA6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC60Q8IWA6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC60Q8IWA6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC60Q8IWA6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.27■■□□□ 1.8
CCDC60Q8IWA6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 UNC93B8-201ENST00000511903 705 ntBASIC26.26■■□□□ 1.79
CCDC60Q8IWA6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 AF131216.4-201ENST00000638924 1588 ntBASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCDC60Q8IWA6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC60Q8IWA6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC60Q8IWA6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.24■■□□□ 1.79
CCDC60Q8IWA6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC60Q8IWA6 SLC6A10P-202ENST00000431994 2058 ntBASIC26.24■■□□□ 1.79
CCDC60Q8IWA6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.23■■□□□ 1.79
CCDC60Q8IWA6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
CCDC60Q8IWA6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC60Q8IWA6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.22■■□□□ 1.79
CCDC60Q8IWA6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC60Q8IWA6 AC131212.1-201ENST00000613771 668 ntBASIC26.22■■□□□ 1.79
CCDC60Q8IWA6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC60Q8IWA6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC60Q8IWA6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 AC092028.1-203ENST00000608262 953 ntBASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC60Q8IWA6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 TSPY9P-201ENST00000440215 945 ntBASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 TSPY11P-201ENST00000442607 1045 ntBASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC60Q8IWA6 CEBPA-AS1-201ENST00000592982 2198 ntBASIC26.19■■□□□ 1.78
CCDC60Q8IWA6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC60Q8IWA6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.19■■□□□ 1.78
CCDC60Q8IWA6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC60Q8IWA6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CCDC60Q8IWA6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC60Q8IWA6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC26.17■■□□□ 1.78
CCDC60Q8IWA6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CCDC60Q8IWA6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 KRT16P3-201ENST00000439127 1283 ntBASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CCDC60Q8IWA6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CCDC60Q8IWA6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC26.14■■□□□ 1.78
CCDC60Q8IWA6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms