Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.7■□□□□ 0.91
LINC00346Q8IVM7 FOXO3B-201ENST00000395675 1928 ntBASIC20.7■□□□□ 0.91
LINC00346Q8IVM7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00346Q8IVM7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00346Q8IVM7 KRT18P10-201ENST00000388836 1287 ntBASIC20.7■□□□□ 0.9
LINC00346Q8IVM7 SPCS2P3-201ENST00000500401 656 ntBASIC20.7■□□□□ 0.9
LINC00346Q8IVM7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.7■□□□□ 0.9
LINC00346Q8IVM7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00346Q8IVM7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 MIR6089-201ENST00000616698 64 ntBASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00346Q8IVM7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00346Q8IVM7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00346Q8IVM7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 AC018755.3-202ENST00000596210 929 ntBASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
LINC00346Q8IVM7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 U85056.1-201ENST00000616429 682 ntBASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00346Q8IVM7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00346Q8IVM7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00346Q8IVM7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 LINC00543-201ENST00000567234 1845 ntBASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
LINC00346Q8IVM7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 RPS2P7-201ENST00000447334 885 ntBASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 DUX4L9-201ENST00000449051 1259 ntBASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00346Q8IVM7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00346Q8IVM7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00346Q8IVM7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINC00346Q8IVM7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.61■□□□□ 0.89
LINC00346Q8IVM7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms