Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.49■■□□□ 1.67
NPAS4Q8IUM7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPAS4Q8IUM7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPAS4Q8IUM7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC25.48■■□□□ 1.67
NPAS4Q8IUM7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
NPAS4Q8IUM7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.48■■□□□ 1.67
NPAS4Q8IUM7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC25.48■■□□□ 1.67
NPAS4Q8IUM7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
NPAS4Q8IUM7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.47■■□□□ 1.67
NPAS4Q8IUM7 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
NPAS4Q8IUM7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.46■■□□□ 1.67
NPAS4Q8IUM7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
NPAS4Q8IUM7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC25.46■■□□□ 1.67
NPAS4Q8IUM7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NPAS4Q8IUM7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
NPAS4Q8IUM7 AC090877.2-201ENST00000558441 1738 ntBASIC25.46■■□□□ 1.67
NPAS4Q8IUM7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
NPAS4Q8IUM7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC25.45■■□□□ 1.66
NPAS4Q8IUM7 AC005837.3-201ENST00000612163 286 ntBASIC25.45■■□□□ 1.66
NPAS4Q8IUM7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.45■■□□□ 1.66
NPAS4Q8IUM7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 SNX5-217ENST00000606557 1087 ntBASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.44■■□□□ 1.66
NPAS4Q8IUM7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 AC133561.4-201ENST00000566112 224 ntBASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 MIR6722-201ENST00000617286 78 ntBASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.43■■□□□ 1.66
NPAS4Q8IUM7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.42■■□□□ 1.66
NPAS4Q8IUM7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
NPAS4Q8IUM7 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.4■■□□□ 1.66
NPAS4Q8IUM7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
NPAS4Q8IUM7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
NPAS4Q8IUM7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC25.39■■□□□ 1.66
NPAS4Q8IUM7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
NPAS4Q8IUM7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NPAS4Q8IUM7 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPAS4Q8IUM7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.38■■□□□ 1.65
NPAS4Q8IUM7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
NPAS4Q8IUM7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPAS4Q8IUM7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
NPAS4Q8IUM7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC25.37■■□□□ 1.65
NPAS4Q8IUM7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NPAS4Q8IUM7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC25.37■■□□□ 1.65
NPAS4Q8IUM7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 AC097639.1-201ENST00000565519 1891 ntBASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NPAS4Q8IUM7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NPAS4Q8IUM7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPAS4Q8IUM7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPAS4Q8IUM7 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NPAS4Q8IUM7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NPAS4Q8IUM7 AC096887.2-201ENST00000623443 1957 ntBASIC25.35■■□□□ 1.65
NPAS4Q8IUM7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 LBH-205ENST00000407930 756 ntTSL 2 BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NPAS4Q8IUM7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPAS4Q8IUM7 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
NPAS4Q8IUM7 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.33■■□□□ 1.65
NPAS4Q8IUM7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms